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We narrowed to 180 results for: car-t

Showing: 41 - 60 of 180 results
  1. Using AAV for Neuronal Tracing

    Type
    Blog Post
    ..., Isa, K., Mizukami, H., Ozawa, K., Isa, T., and Yamamori, T. (2015). Comparative analyses of adeno-associated...Pignatelli, M., Rivest, A.J., Jung, H.-Y., Kitamura, T., Suh, J., Frank, D., Kajikawa, K., Mise, N., Obata...PubMed Central PMCID: PMC4269290. Masamizu, Y., Okada, T., Kawasaki, K., Ishibashi, H., Yuasa, S., Takeda, ...24695228. PubMed Central PMCID: PMC5102064. Roberts, T. F., Hisey, E., Tanaka, M., Kearney, M., Chattree,...Tervo, D.G.R., Huang, B.-Y., Viswanathan, S., Gaj, T., Lavzin, M., Ritola, K.D., Lindo, S., Michael, S....Wickersham, I.R., Lyon, D.C., Barnard, R.J.O., Mori, T., Finke, S., Conzelmann, K.-K., Young, J.A., and Callaway... PubMed Central PMCID: PMC5529245. Choi, V.W., McCarty, D.M., and Samulski, R.J. (2005). AAV Hybrid Serotypes...
  2. Deaminet 2026: Breakthroughs in Base Editing, Deaminase Biology, and Therapeutic Translation

    Type
    Blog Post
    ...and resulting deaminase edits. Applied in primary T cells, the method nominates over 460-fold more off...editing efficiencies were sufficient to prime robust T cell responses, converting immunologically cold tumors...Herron, L., Doctor, Y., McRae, F., Wang, J., Hirsch, T., Portell, A., Kumar, S., & Mali, P. (2025). Regulatable....1038/s41586-025-09732-2 Richter, M. F., Zhao, K. T., Eton, E., Lapinaite, A., Newby, G. A., Thuronyi,...Lilieholm, M. K., Laparte, D., Collier, M. D., Aunins, T., Harjanto, D., Chang, A. N., Reyon, D., & Duffield...2075. https://doi.org/10.1101/gr.280164.124 Wang, T., Jessa, S., Marinov, G. K., Klemm, S., Kundaje, A...., Lindner, J. M., Platten, M., Offringa, R., Carretero, R., Ruppin, E., Levanon, E. Y., & Papavasiliou...
  3. Hot Plasmids: Spring 2025

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    Blog Post
    ....2024.11.007. Branon, T. C., Bosch, J. A., Sanchez, A. D., Udeshi, N. D., Svinkina, T., Carr, S. A., Feldman...B. C., Morgan, M. A., Andersen, G. D., Bartom, E. T., & Shilatifard, A. (2024). TurboCas: A method for...! Furlanis, E., Dai, M., Leyva Garcia, B., Tran, T., … Dimidschstein, J., Fishell, G., Wang, Y. (2024...host cell but with space to insert your genetic cargo of choice. After hearing about researchers' favorite...) outside of the homology elements allowed for scarless insertion — no UTR sequence added to the genome...outside of the homology arms (red) to allow for scarless insertion of the payload (teal). The Cas9 gRNA...homology-directed repair (HDR), and insertion is scarless, unlike previous integrase-based approaches. Find...
  4. What's New in CRISPR - December 2019

    Type
    Blog Post
    ...base editors   Single base editor that induces C-to-T and A-to-G mutations Nozomu Yachie’s lab recently ...a base editor that combines the abilities of C-to-T and A-to-G base editors into one protein. They fused...editing CRISPRi toolkit for Burkholderia Silvia Cardona’s lab recently developed a CRISPRi toolkit for Burkholderia...
  5. Starter Guide to induced Pluripotent Stem Cells (iPSCs) Part 2:  Reprogramming and Transdifferentiation

    Type
    Blog Post
    ...20888316. PubMed Central PMCID: PMC3656821. 10. Aasen, T., et al., Efficient and rapid generation of induced...18931654. 11. Loh, Y.H., et al., Reprogramming of T cells from human peripheral blood. Cell Stem Cell,...20621044. PubMed Central PMCID: PMC2913590. 12. Zhou, T., et al., Generation of human induced pluripotent ...PubMed Central PMCID: PMC4412587. 28. Mohsen-Kanson, T., et al., Differentiation of human induced pluripotent...p. 568-72. PubMed PMID: 10802714. 41. Vierbuchen, T., et al., Direct conversion of fibroblasts to functional... 20] Osteoclasts and osteoblasts [21, 22] Cardiomyocytes [23, 24] Smooth muscle cells [25] Skeletal... recent works, transdifferentiation is usually carried out by expressing transcription factors specific...
  6. Typing CRISPR Systems

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    Blog Post
    ...Joung, J., Belanto, J. J., Verdine, V., Cox, D. B. T., Kellner, M. J., Regev, A., Lander, E. S., Voytas...https://doi.org/10.1126/science.1231143 Cox, D. B. T., Gootenberg, J. S., Abudayyeh, O. O., Franklin, B...doi.org/10.1126/science.aav4294 Hu, C., Myers, M. T., Zhou, X., Hou, Z., Lozen, M. L., Nam, K. H., Zhang...Taylor, H. N., Laderman, E., Armbrust, M., Hallmark, T., Keiser, D., Bondy-Denomy, J., & Jackson, R. N. (...doi.org/10.1126/science.aav7271 Yoshimi, K., & Mashimo, T. (2022b). Genome editing technology and applications... like Cas9. The Cascade complex doesn’t usually carry out the function of the specific CRISPR type but...is not known, but it’s suspected that they don’t carry out the same types of adaptive immune functions ...
  7. Rinehart Lab Phosphoprotein Reagents

    Type
    Collection
    ...Li, J., Rad, R., Mintseris, J., Mohler, K., Levy, T., Aguiar, M., Beausoleil, S. A., Paulo, J. A., Rinehart...., Rogulina, S., Cheng, L., Olds, W., Fischer, J. T., Söll, D., Isaacs, F. J., & Rinehart, J. (2012). ...2011) described in: Park, H., Hohn, M. J., Umehara, T., Guo, L., Osborne, E. M., Benner, J., Noren, C. J...PCRT7 tetR pLtetO MBP-MEK1 XX Amp) Strain 52055 EcAR7 Plasmid 52054 SepOTSµ ( aka. B40 OTS) Strain 34929...
  8. Antibody Validation for Flow Cytometry

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    Blog Post
    ..., A., Carr, S., Edwards, A., Ellenberg, J., Lundberg, E., Rimm, D. L., Rodriguez, H., Hiltke, T., Snyder..., M. S., Smallwood, D. T., Weston, C. A., Castells, E., Bowman, V. W., McCarthy, J., Amrani, Y., Duffy...McDowell, I., Southern, K., Reintsch, W., Durcan, T. M., Brown, C., Bandrowski, A., Virk, H., Edwards,...Benaliouad, F., Gileadi, O., McBride, H. M., Durcan, T. M., Edwards, A. M., Healy, L. M., Robertson, J., ...Snyder, M., & Yamamoto, T. (2016). A proposal for validation of antibodies. Nature Methods, 13(10), 823–... interpreting your data therefore necessitates careful design of RNAi sequences, confirmation of RNA knockdown...
  9. Viral Vectors 101: AAV Serotypes and Tissue Tropism

    Type
    Blog Post
    ...Ishikawa, Y., Jae, L. T., Wosen, J. E., Nagamine, C. M., Chapman, M. S., & Carette, J. E. (2016). An essential...https://doi.org/10.1038/s41598-025-05518-8 Bish, L. T., Morine, K., Sleeper, M. M., Sanmiguel, J., Wu, D...Tervo, D. G. R., Hwang, B.-Y., Viswanathan, S., Gaj, T., Lavzin, M., Ritola, K. D., Lindo, S., Michael, S...Huang, C.-C., Gerfen, C. R., Schiller, J., Dudman, J. T., Hantman, A. W., Looger, L. L., Schaffer, D. V., ...Laminin receptor (LR)3 AAV receptor (AAVR)2 Carboxypeptidase D (CPD), also called AAVR25   AAV9 Terminal...receptor (LR)3 Putative integrin3 AAV11 Carboxypeptidase D (CPD), also called AAVR25   1Wu, Miller... also been found to transduce skeletal muscle, cardiac, and retinal cells (Issa et al., 2023). AAV2 Despite...
  10. Interview: Hodaka Fujii on enChIP, New CRISPR Tools, and More

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    Blog Post
    ...Expression System for enChIP Using CRISPR. Fujita T, Fujii H. PLoS One. 2014 Jul 22;9(7):e103084. doi:...molecule-mediated chromatin immunoprecipitation (enChIP). Fujita T, Asano Y, Ohtsuka J, Takada Y, Saito K, Ohki R, Fujii...immunoprecipitation (enChIP) using CRISPR. Fujita T, Fujii H. Biochem Biophys Res Commun. 2013 Aug 11....scheme very nice at first sight in that Addgene takes care of everything including MTA and shipping. Addgene... scientific societies. Addgene: Throughout your career, you have held research appointments in the US ...different parts of the world in my early research career. I've found that research institutes in different... Caroline LaManna...
  11. Sleeping Beauty Awakens for Genome Engineering

    Type
    Blog Post
    ...vector for CD19-directed chimeric antigen receptor (CAR) therapy. SB is a valuable tool and an alternative...Sleeping Beauty to genetically modify clinical-grade T cells to target CD19. Immunol Rev. 2014 Jan;257(1)...
  12. Deisseroth INTRSECT Collection

    Type
    Collection
    ... Chuhma N, Mingote S, Yetnikoff L, Kalmbach A, Ma T, Ztaou S, Sienna AC, Tepler S, Poulin JF, Ansorge ...Müller K, Fenno L, Kim YS, Ramakrishnan C, Andrási T, Deisseroth K, Holmes A, Hájos N. 2019. Excitation... C, Dorrier CE, Tipton GJ, Ramakrishnan C, Kozicz T, Deisseroth K, Thiele TE, McElligott ZA, Holmes A,...Cre Yes 137135 pAAV-Ef1a-oScarlet None Yes 137136 pAAV-Ef1a-Con/Fon-oScarlet Cre AND Flp Yes 137137 pAAV-Ef1a-Con...pAAV-Ef1a-Con/Foff 2.0-oScarlet Cre AND NOT Flp FRT/F5 Yes 137138 pAAV-Ef1a-Coff/Fon-oScarlet Flp AND NOT Cre...137158 pAAV-nEF-ChRmine-mScarlet None Yes 137159 pAAV-nEF-Con/Fon-ChRmine-oScarlet Cre AND Flp Yes 137160...Fon-ChRmine-oScarlet Cre AND NOT Flp FRT/F5 Yes 137161 pAAV-nEF-Con/Foff 2.0-ChRmine-oScarlet Flp AND NOT...
  13. A History of Genome Engineering in Popular Culture

    Type
    Blog Post
    ...itself a combination of the four bases of DNA – A, T, G, and C. In this movie Ethan Hawke’s character revolts...editors (CBE) use a cytidine deaminase to introduce a C→T change at precise locations in the genome. This was...Publisher Correction: Programmable base editing of A•T to G•C in genomic DNA without DNA cleavage. Nature....7326/0003-4819-138-7-200304010-00015 Wood AJ, Lo T-W, Zeitler B, Pickle CS, Ralston EJ, Lee AH, Amora...MacLeod, and Maclyn McCarty’s experiment debunked the myth that protein is the carrier of genetic information...of our research.  Want the Genome Editing Trading Card seen in this blog post?Download high resolution ...10.1038/s41586-019-1711-4 Avery OT, MacLeod CM, McCarty M (1944) STUDIES ON THE CHEMICAL NATURE OF THE ...
  14. Hot Plasmids: Winter 2025

    Type
    Blog Post
    ...editing plasmids here! Vu, T. V., Nguyen, N. T., Kim, J., Song, Y. J., Nguyen, T. H., & Kim, J.-Y. (2024)...pU6cm promoter, viral replicon amplification of cargo, and heat treatment.  Figure 1: Left: recombined...and adopts an open conformation in the absence of cargo. bioRxiv 2024.12.20.629623; doi: https://doi.org...
  15. pSiM24: Simplifying Plant Genetic Engineering

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    Blog Post
    ...Agrobacterium, along with a selectable marker. Left and right T-DNA borders specify the region of DNA that will be...pKM24KH.To reduce vector size, they shortened the T-DNA borders to 25 bases each. By switching the E. ...around Agrobacterium tumifaciens. Agrobacterium carries a “tumor-inducing” or Ti plasmid, which allows ...
  16. Lentivirus ddPCR Titration

    Type
    Protocol
    ...to calculate the infectious titer: $$T = {V*C*D\over v}$$ Where: T = Infectious titer, TU/mL V = Viruses...Bio-Rad, 1863005 DG8 cartridge, Bio-Rad, 1864008 DG8 gasket, Bio-Rad, 1863009 DG8 cartridge holder, Bio-Rad... Generating the Droplets Place a DG8 cartridge into the cartridge holder. Using a 2–50 µL multichannel...Cover the cartridge with the DG8 gasket, making sure that it is secure. Transfer the cartridge holder to... centrifuge and place on ice. Wipe down a DG8 cartridge holder with bleach and place it in the Biological...Add 16 µL of the master mix to each PCR tube. Be careful to dispense to the bottom of the tube without collecting...reaction mixtures into the middle wells of the cartridge. Add 800 µL of droplet generation oil to a polystyrene...
  17. RUBY-Red Siliques

    Type
    Blog Post
    ...linkages and a terminator. Image from He, Y., Zhang, T., Sun, H. et al. Hortic Res. (2020).   I can do...References and Resources References  He, Y., Zhang, T., Sun, H. et al. A reporter for noninvasively monitoring...pigments primarily found in plants in the order Caryophyllales, such as cacti and beets. Betanin belongs to... Biology Department at the University of North Carolina at Chapel Hill. He has a passion for microscopy...
  18. Tips for Screening with Yeast Two Hybrid Systems

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    Blog Post
    ...1989; 340:245-246. PubMed PMID: 2547163. 5. Ozawa, T., Kaihara, A., Sato, M., Tachihara, K., Umezawa, Y.l...11403293. 6. Chen, Y.C., Rajagopala S.V., Stellberger T., Uetz P.  Exhaustive Benchmarking of the yeast two-hybrid...PMC2965261. 8. Obrdlik, P., El-Bakkoury, M., Hamacher, T., Cappellaro, C., Vilarino, C., Fleischer, C., Ellerbrok...experiments must be set up, conducted and analysed with care to get reliable information. Although two-hybrid...
  19. CRISPR 101: Which Cas9 Do I Choose for My CRISPR Experiment?

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    Blog Post
    ...single base pair edit. (Cytosine deaminases edit C-to-T and adenosine deaminases edit A-to-G.) In short, the...editing window, for example all C’s will edit to T’s. Thus, it’s important that there are no “bystander...editing. Nat. Commun. 2017 81 8, 1–9 (2017).Walton, R. T., Christie, K. A., Whittaker, M. N. & Kleinstiver,...platform to deliver various cargo to a specific DNA locus by directly fusing the cargo to dCas9.  This technique...next? Designing or selecting a sgRNA Addgene may carry a validated sgRNA for your target gene.  Validated...CRISPR Experiment Cas9 expression systems Addgene carries a variety of Cas9 containing plasmids that have...
  20. What the HEK?

    Type
    Blog Post
    ... the most commonly used line expresses SV40 large T antigen and is thus dubbed HEK-293T. Given that the...viral production because they express the SV40 large T-antigen. This allows them to replicate viral plasmids...machinery) along with the viral plasmid containing the cargo of interest, and HEKs will produce and package viral...
Showing: 41 - 60 of 180 results