Skip to main content

We narrowed to 466 results for: SHI

Showing: 101 - 110 of 466 results
  1. Engaging with science and society at pgEd

    Type
    Blog Post
    Published
    Sept. 20, 2018, 12:17 p.m.
    ...teachers; organizing Congressional briefings in Washington DC; convening meetings of experts and leaders...the biological sciences, as well as to acquire leadership and communication experience. These included ... lectures, writing science articles for a lay readership, and working with middle and high school students...obtaining my PhD and working in digital academic publishing for a year, I’ve since returned to pgEd as a ...
  2. The Materials Science of Optogenetics Experiments

    Type
    Blog Post
    Published
    Sept. 17, 2015, 2:30 p.m.
    ... impossible to interpret. Polishing the fiber optics with diamond polishing paper of sequentially increasing...its output with a light meter before and after polishing. Efficiency of the implant should be at least ... output. The same considerations apply to the polishing and preparation of the patch cable (although you...
  3. Chromoproteins: Colorful Proteins For Molecular Biology Experiments

    Type
    Blog Post
    Published
    Feb. 4, 2020, 2:15 p.m.
    ...a FRET acceptor to mRuby2 or mScarlet. Image: Murakoshi et al., 2019. ShadowR is an orange light-absorbing...light-absorbing chromoprotein that Hideji Murakoshi’s lab developed as an acceptor for fluorescence lifetime...https://doi.org/10.1074/jbc.m606921200 Dove SG, Takabayashi M, Hoegh-Guldberg O (1995) Isolation and Partial...1). https://doi.org/10.1186/s13036-018-0100-0 Murakoshi, H., Horiuchi, H., Kosugi, T., Onda, M., Sato,...
  4. Better Dyeing Through Chemistry & Small Molecule Fluorophores

    Type
    Blog Post
    Published
    Sept. 8, 2016, 2:30 p.m.
    ...properties once exclusive to small-molecules: red-shifted spectra, ion sensitivity, photoactivation, etc....sample is wholly dependent on the photon budget and pushing the frontiers of fluorescence microscopy often ...can feel like a college student searching couch cushions for spare change, desperate to extract a few more...which is particularly important for samples where washing is difficult, such as intact tissue. Some chemical...
  5. Four Base Editing Reporters to Monitor and Enrich Editing in Real-time

    Type
    Blog Post
    Published
    July 7, 2020, 1:15 p.m.
    ...insertion that disrupts fluorescence due to a frameshift. Restoration of fluorescence can only occur through...Harris Lab relies on the restoration of a frame-shift in mCherry that restores fluorescence to monitor...tyrosine generating a GFP variant (GFPY66) that has a shifted emission spectra. Thus a successful base editing...with a cytidine deaminase base editor results in shift in emission spectra from BFP to GFP. Image from ...
  6. CRISPR-mediated Plant Base Editors

    Type
    Blog Post
    Published
    Jan. 3, 2019, 1:35 p.m.
    ...two independent groups (Komor et al., 2016 and Nishida et al., 2016) invented CRISPR-base editors by tethering...27096365. PubMed Central PMCID: PMC4873371.  2. Nishida, Keiji, et al. "Targeted nucleotide editing using...25733849. PubMed Central PMCID: PMC4371917. 5. Shimatani, Zenpei, et al. "Targeted base editing in rice...PubMed Central PMCID: PMC5972399. 12. Molla, K., Shih, J. & Yang, Y. Multiplex CRISPR-mediated base editing...
  7. CRISPR 101: Validating Your Genome Edit

    Type
    Blog Post
    Published
    Nov. 3, 2022, 12:15 p.m.
    ...for. Secondly, categorize your edit – is it any frameshift mutation? A specific insertion or deletion? A...line is desired, any mutation that introduces a frameshift in the coding region of interest will get the...and run the PCR product on a gel to look for size shifts. Once you’ve identified homozygous clones, however...large so that you can easily visualize the size shift you anticipate. A good rule of thumb is to keep ...
  8. Multiple Plasmids at a Low Price: Kits from Addgene

    Type
    Blog Post
    Published
    Sept. 14, 2016, 2:30 p.m.
    ...initiation heavily dependent upon the core of a Shine-Delgarno sequence found at the 3’ end of the leader...was predictable based solely on the promoters and Shine-Delgarno sequences used in this so-called bicistronic...Academy of Sciences 113.9 (2016): 2388-2393. Huang, Shijie, Xuechen Zhu, and Charles E. Melançon III. "Detection...ChemBioChem 17.10 (2016): 895-899. Choudhury, Rajarshi, et al. "Engineering RNA endonucleases with customized...
  9. Troubleshooting and Optimizing a Western Blot

    Type
    Blog Post
    Published
    Sept. 17, 2024, 1:15 p.m.
    ...own piece (3). After incubation, blocking, and washing, the membrane is reassembled and imaged. In this...(PBS) are the most commonly used solutions for washing. If your background noise is high, you can consider...Like blocking, you don’t want to skimp on your washing steps! It’s important to let them wash for the ...sequence not accurate Check plasmid sequence for frameshifts and stop codons Weird background patterns...primary antibody at 4 °C overnight Incomplete washing Ensuring wash is happening under sufficient agitation...
  10. Hot Plasmids: Spring 2025

    Type
    Blog Post
    Published
    June 3, 2025, 1:15 p.m.
    ...efficiency and specificity. With TurboCas, the Ali Shilatifard Lab was able to identify both new and known regulators...miniTurboID with dCas9 to create TurboCas, the Shilatifard Lab created a very quick and efficient way to...Morgan, M. A., Andersen, G. D., Bartom, E. T., & Shilatifard, A. (2024). TurboCas: A method for locus-specific....2024.11.007. Branon, T. C., Bosch, J. A., Sanchez, A. D., Udeshi, N. D., Svinkina, T., Carr, S. A., Feldman, J. ...
Showing: 101 - 110 of 466 results