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We narrowed to 851 results for: CAL

Showing: 541 - 560 of 851 results
  1. Transferable Skills Guide: External Collaborations

    Type
    Blog Post
    Published
    April 19, 2018, 1:25 p.m.
    ...gives Snapgene great exposure to the community of biological scientists who use Addgene everyday. To get this...from other institutions personally on conference calls and make sure to maintain these relationships by...speakers for a meetup or recruit volunteers for your local animal shelter. There are many opportunities so ...Universities themselves can help you do this through practical tools like alumni networks. I find it useful to...
  2. CRISPR-mediated Plant Base Editors

    Type
    Blog Post
    Published
    Jan. 3, 2019, 1:35 p.m.
    ... defective gene, Xm, the sequence of which is identical to the correct gene, Xw, except for a single base...precisely changes a single base with an efficiency typically ranging from 25-75%, while the success of precise... in the DNA by cutting only a single strand, dramatically reducing the likelihood of detrimental indel...known 'DNA adenosine deaminases' which would theoretically give rise to an adenine base editor. A massive...
  3. Antibiotic Resistance: An Old Solution but a New Problem

    Type
    Blog Post
    Published
    Nov. 10, 2016, 3:30 p.m.
    ...possess cell walls. As a result, Mycoplasma are intrinsically resistant to this class of antibiotic. Acquired...When antibiotic resistance testing is requested clinically, this involves growing a standardized amount ...certain antibiotic were chosen for treatment. This is called a Kirby-Bauer disk diffusion test or Kirby-Bauer...-trusted method that is frequently used in the clinical laboratory. What can we do to stop the emergence...
  4. Getting the Most from Your Lentiviral Transduction

    Type
    Blog Post
    Published
    April 7, 2016, 2:30 p.m.
    ...contamination. For those labs that prefer a more economical mode of detection, Uphoff et. al. outline a do...engineered with non-native envelopes, a process called pseudotyping. Lentiviruses pseudotyped with the...virus. To circumvent this problem, transductions typically employ the positively charged polycation, polybrene...lentiviral and retroviral vectors.” Human Gene Therapy Clinical Development 25.3 (2014). 175-85. Pubmed PMID: ...
  5. Plasmids 101: E. coli Strains for Protein Expression

    Type
    Blog Post
    Published
    Feb. 10, 2015, 3:06 p.m.
    ...on DNA, or are enzymatically active. For this reason, recombinant proteins are typically expressed in E...medium. Induction timing is important, as you typically want to make sure your cells have first reached...your expression conditions by setting up a small-scale expression experiment to test variables such as ...
  6. The Advances Behind The World's First Personalized CRISPR Treatment

    Type
    Blog Post
    Published
    Sept. 16, 2025, 1:15 p.m.
    ...regulators. But the speed is impressive on a larger scale, too. The first paper reporting genome editing by..., 2016). Advancing from this invention to KJ’s clinical application in under a decade is an astounding... safety of KJ’s experimental treatment, it was critical to reduce off-target editing as much as possible...P. (2025). Custom CRISPR-Cas9 PAM variants via scalable engineering and machine learning. Nature, 643(...
  7. Antibodies 101: Introduction to Immunofluorescence

    Type
    Blog Post
    Published
    Nov. 16, 2021, 2:15 p.m.
    ...ICC or a tissue in the case of IHC. IF is used specifically when we visualize the antibodies using fluorescence...counterstaining, mounting sample on slides, and confocal   Figure 2: High-level overview of an ...controls to show that your antibodies are binding specifically. For positive controls, aim to use samples that...in an organism that is underrepresented in the biomedical research community. You may have to take some...
  8. Deep Mutational Scanning with One Pot Saturation Mutagenesis

    Type
    Blog Post
    Published
    Feb. 22, 2017, 3:30 p.m.
    ...control over where mutations are introduced, and scalability (see Supplementary Table 1 of Wrenbeck et al)...stretches of sequence could be used. However, a practical limitation is sequencing depth and cost. You need...Measuring the Activity of Protein Variants on a Large Scale Using Deep Mutational Scanning.” Nature Protocols...scanning: assessing protein function on a massive scale." Trends in Biotechnology 29.9 (2011): 435-42. PubMed...
  9. Plasmids 101: Gibson Assembly and Other Long-Homology Based Cloning Methods

    Type
    Blog Post
    Published
    March 1, 2016, 3:30 p.m.
    ... regions of homology at their ends, which are typically created by PCR. Then, the fragments are incubated...competent cells. The success rate of this reaction is typically fairly high, so there is usually no need to screen...the bacterial chromosome (up to 100 kb) were specifically cut out via CRISPR and then assembled into a...amplify the fragments of the chromosome, which was technically challenging. Other homology based technologies...
  10. Easi-CRISPR: Generating Knock-In and Conditional Mouse Models

    Type
    Blog Post
    Published
    April 5, 2018, 12:42 p.m.
    ...simple in C. elegans and bacteria. But CRISPRing typical mouse models, including creating Cre-dependent ...on both sides and the T7 promoter on one end. Typically, Easi-CRISPR works best with insertions of 2 kb...models varies from 8.5-100% of pups born, with typical efficiencies of 30-60%. Quadros et al. attribute...2.5x more animals than i-GONAD and is a more technically difficult process. Overall, the main drawback...
  11. PiggyBac-ing Through the Genome Editing Field

    Type
    Blog Post
    Published
    May 31, 2016, 3:30 p.m.
    ...facilitates the integration of the transposon specifically at ‘TTAA’ sites randomly dispersed in the genome...re-integration from the piggyBac™ donor, which is typically found with the wild-type piggyBac™ transposase..., including making transgenic cell lines and genetically-modified cell lines. Furthermore, the use of ...cell engineering team.     Mathew Goodwin is a Technical Sales Specialist at Transposagen. As a gene editing...
  12. How to Design Your gRNA for CRISPR Genome Editing

    Type
    Blog Post
    Published
    Sept. 24, 2020, 1:15 p.m.
    ...desired location of edit; efficiency decreases dramatically when the cut site is >30nt from the proximal... constraints are even more exquisite for the so-called base editor Cas9, which makes DNA changes in the...nuclease-mediated off-target effects.” Further, large-scale datasets of hundreds of genetic screens using genome-wide... sequences targeting a gene to score in order to call that gene a hit.  This is an exciting time for functional...
  13. A Needle in a Base-Stack: Cas9 Structural Biology

    Type
    Blog Post
    Published
    June 4, 2024, 1:15 p.m.
    ... BioRender.com.   Cas9 has two major lobes, called NUC (for nuclease) and REC (for recognition). The...recognizing the PAM on DNA, the CTD is also sometimes called the PAM-interacting (PI) domain. The guide RNA ...conformational state of the HNH domain also allosterically controls RuvC activity through a hinge region...Visualization, and Informatics at the University of California, San Francisco, with support from National Institutes...
  14. 5 Science Rap Videos & Their Creator: Tom McFadden

    Type
    Blog Post
    Published
    Feb. 9, 2017, 3:30 p.m.
    ...African American woman whose cervical cancer cells became a mainstain of biological study without her or her...fossil rocks and their importance in understanding biological history. 4. Please Don't Kill My Hive Beautifully...
  15. Performing In Vivo CRISPR Screens Using the FITS Approach

    Type
    Blog Post
    Published
    May 2, 2024, 1:15 p.m.
    ...important immune cell type, in more complex and physiological microenvironments. These screens have primarily...molecular identifiers, which can improve the statistical power of in vivo screens. Figure 1: Using...Fellow in Arlene Sharpe’s laboratory at Harvard Medical School and is interested in improving CD8+ T cell...
  16. Antibody Validation for Flow Cytometry

    Type
    Blog Post
    Published
    Sept. 10, 2024, 1:15 p.m.
    ...multiple timepoints. When the target of interest is critical to cell survival or proliferation, an additional...a flow cytometry experiment. But validation is critical to ensuring accurate interpretation of your results...to start with a screening procedure in easily genetically modified cell types (top). The specific approach..., A. M., McPherson, P., & Laflamme, C. (2023). Scaling of an antibody validation procedure enables quantification...
  17. Bringing Sustainable Practices to the Lab: Easy Action Items

    Type
    Blog Post
    Published
    April 22, 2019, 12:26 p.m.
    ...alternatives for some of the harmful chemicals in your lab. These chemicals are not only better for the environment... resources about this, and even has a list of biological samples that are stored long term at -70 °C. ...
  18. What's New in CRISPR - Winter 2018

    Type
    Blog Post
    Published
    Dec. 18, 2018, 1:17 p.m.
    ...plasmids available at Addgene. We will still periodically focus on specific CRISPR plasmid tools more ... Feng Zhang’s lab recently developed a platform called SHERLOCK (specific high-sensitivity enzymatic reporter...will help researchers map transcription factor localization and binding via ChiP-seq. Learn more about...
  19. Make a Splash: Notions of Scientific Impact Are Evolving

    Type
    Blog Post
    Published
    Dec. 5, 2014, 2:54 p.m.
    ...papers detailing Nobel Prize-winning research typically weren’t among the most cited. And, as scientific...online, surely times have changed. Altmetrics.org calls to expand our view of what impact looks like and... aren’t enough. Scientists are sharing what they call “raw science” – data sets, code, and, I think it...
Showing: 541 - 560 of 851 results