...example, DNA assembly methods, such as Gibson Assembly® and NEBuilder® HiFi DNA Assembly, require nick-selective...Plasmid Cloning Techniques Pushing the Limits of DNA Assembly Plasmid Cloning by PCR Resources on Addgene.org...

....twitter.com/DWKWaPs0iY— Xi Chen (@XiChen7889) December 10, 2021   2nd Place: The Winter and the Falcon...pic.twitter.com/rDaEjxTNZX— Heng Chooi (@YitHengChooi) December 4, 2021   3rd Place: O! Beaker Tree Created by...pic.twitter.com/WMb97fpUOI— Sam Mugford (@samtmugford) December 3, 2021   Congratulations to all our winners,...

... extensively with CRISPR, and recently became a member of the Addgene advisory board where he will help...and talk with us.  Alejandro (Alex) Chavez is a member of the Addgene Scientific Advisory Board with a...Ready-to-Use CRISPR Lentivirus Learn about Other Members of the Addgene Leadership Team ...

...pic.twitter.com/X6QYXteRLT — Nika Heijmans (@nikaheijmans) December 21, 2018 Eppi the red nosed reindeer from @ladiesinlabcoats....co/MYMnXicWqb — Matthew J. Sikora (@mjsikora) December 18, 2018 Fireplace from the Dyer Lab If you’re...pic.twitter.com/bDRqAKrWHz — Dyer Lab (@DyerLab_Emory) December 14, 2018 Thanks to all who participated in ...

...them. Collectively, the pool of CRISPR software embodies solutions that facilitate most experimental applications...in the table): Basic functions: These functions embody the main goals of the software and should be the...genomes are denoted by organism name and genome assembly version. The names in the table appear as they...organisms and will help you whether you have a full assembly or not. It is an offline tool, but comes with ...

...meetings include all collaborators, from the lab members who are conducting the experiments to the PIs. ...closely replicates how you’d interact with team members in person, and improves overall communication.  ... informal communication you’d likely have with members of your lab that you see in person, and helps improve...

... the pores being opened in the pathogen’s cell membrane (Dunkelberger & Song, 2010). As cells cannot survive... survive when holes are punched in their membranes, the pore'd pathogens quickly lyse and die.  Antibody...providing structure and isotype determination, remember that it can do so much more than that!    References...

...This grows our relationship with our community members. We also find that, as a nonprofit, we attract ...is strength in diversity and in empowering team members to take initiative and give their best As we continue...Research Listen to Our Interview with Addgene Board Member, Connie Cepko Resources on Addgene.org Learn ...

...characteristics like pH, redox state, and voltage across membranes. These sensors generally follow the same pattern...an organelle-specific targeting signal or a transmembrane domain, biosensors can be targeted to a particular...endoplasmic reticulum (ER), vacuole or cellular membranes. Examples include blue flame mitochondria-targeted...

...pAAV-Syn-FLEX-rc [Archon1-KGC-GFP-ER2]) of this membrane-embedding voltage detector. Find Archon1 and its cre-dependent...GABA sensor (pAAV.hSyn-FLEX.iGABASnFR) has good membrane localization and brightness. The F102G variant...

...& Biology Society (EMBC), 4322–4325. https://doi.org/10.1109/EMBC44109.2020.9175600 Park, S., Loke, G....who together developed multifunctional fibers, embedded, and validated simultaneously in the brain and...

...10,000 users per month in November 2014 to ~30,000 users per month in November 2015. We will continue ...providing recorded interviews with Addgene community members. In addition we’ve experienced incredible growth...

...Tat. Although CPP fusions can translocate a cell membrane, the presence of the CPP may alter protein function...various loxP reporters. In both mouse and human embryonic stem cells, they found very high recombination...neuronal and gut stem cells, dendritic cells, embryonic fibroblasts, glia cells and neurons, and cell ...

...differentiation, the Zhang lab transduced human embryonic stem cells with the viral TF library, with each...lentiviral particles and used to transduce human embryonic stem cells. Transduced stem cells were differentiated...this screen successfully differentiated cells resembling all three germ layers (ectoderm, endoderm, and...

... out these questions ahead of time so that lab members have time to prepare their thoughts. Then at the...Set up a brief bi-weekly meeting where all lab members talk no science. No data presentation will appear...remotely in science are endless. Let’s adapt and embrace new ways of working, reconnect as human beings ...

...editing system to correct the cystic fibrosis transmembrane conductor receptor (CFTR) by homologous recombination...of CRISPR/Cas9." Cell Stem Cell. 13, 659-662 (5 December 2013). 8. Gerald Schwank et al. "Functional Repair...Fibrosis Patients." Cell Stem Cell. 13, 653-658 (5 December 2013).    ...

...Institute for Biologically Inspired Engineering and member of the Addgene Advisory board, on the difficulty...expressing Cas9. As John Doench (Broad Institute and member of the Addgene Advisory Board) says: "When you'... running. Both Alex Chavez and John Doench are members of the Addgene Advisory Board. Additional Resources...

...everyone gets a chance to talk and less vocal team members still have their voices heard. Here's a template...of the agenda, and assign each one using group members’ initials. If appropriate, email this around after...to help keep you accountable for moving along. Remember, many of the more in-depth discussions can happen...

...and improving accessibility on our website.  As members of Addgene’s content team, we — Jo, Brook, and ... at the Society for Neuroscience conference in November 2023, we hosted our very first professional development...clear writing Let’s use Figure 1 as our example. Remember, our goal is to use words to describe the image...

...viral envelope, which fuses with the target cell’s membrane, allowing the viral particle access into the cell...inside the nucleus, without the need for envelope disassembly. Both lenti and retro viruses can accommodate...of murine leukemia virus DNA depends on mitosis.” EMBO J. 12 (1993) 2099-2108. PubMed PMID: 8491198. PubMed...

...adjunct faculty member) have together been working toward this goal for years as members of the ENCyclopedia...the second plasmid can be done in one day in one assembly reaction. This second plasmid saves you a couple...

...and names, swapped leadership, and grown to 25 members.  What is Sample6? Sample6 is an enrichment-free...technologies, effectively communicating the advantages embodied, and driving the enterprise value of Sample6.  ...Read On! Synthetic Biology & the Importance of Assembly Standards Story of a SynBio Startup: RevBio's ...

... that determine membrane expression and plasma membrane localization of transmembrane proteins, like rhodopsins...

... indirect (secondary) methods. In those cases, remember that a secondary should be used when signal amplification...price point, shipping time, or other factors. Just remember that these are secondary considerations to validation...validated using one or more of the proposed pillars.  Remember, validation does not mean that the antibody is...

... grow. We are hiring again and getting ready to embark on new exciting projects. Right now we don’t .... We are making an impact.  {% video_player "embed_player" overrideable=False, type='scriptV4', hide_playlist..._playlist=True, viral_sharing=False, embed_button=False, width='1280', height='720', player_id='7039679868...

...found at Addgene! Figure 1: Strategy for assembling the barcoded gRNA library pool. (Adapted from...barcoded gRNA library is now ready for CombiGEM-based assembly into the CombiGEM lentiviral vector backbone pAWp12...your experiments. Figure 2: Strategy for assembling barcoded combinatorial gRNA libraries. (Adapted...

...While this method seems simple, I found it hard to remember to describe all four parts of a STAR answer once...Writing a rough outline of these stories helped me remember them for the interview.  Prepare a list of questions...then thank them once the interview is complete. Remember, your interviewers took time out of their day ...

... stimulation. CRY2clust enables faster assembly and disassembly dynamics, higher sensitivity to light,... protein kinase A (PKA) activity at the plasma membrane in living cells using a construct in which TagRFP-T...

...Protein A and B interact, the FP fragments can assemble the full structure of the fluorescent protein,...Split superpositive GFP Split-superpositive GFP reassembly is a fast, efficient, and robust method for detecting...behavior of the split FP in your system of interest. Remember that the FP fragments themselves can sometimes...

...poster readable While we are talking about font, remember this: bigger is better! Your poster should be ...poster more navigable.  Choose your content wisely Remember that less is more! Posters should not look like...easily read. Similarly, be cognizant of audience members that are color-blind; avoiding red and green is...

...electrostatic forces between these two negatively-charged membranes (Davis et al., 2002). Polybrene is one such cationic... thawed more than once. Fibronectin is another membrane-interacting protein that can be used to enhance...receptor-independent virus adsorption on target cell membranes." Biophysical chemistry 97.2 (2002): 159-172. ...

...designing primers, and running analyses. New team members have taken up to a month to design a single 96-...began building CrispyCrunch in July 2018 and in November, we began using it internally. Guiding principles...biopython, bwa, samtools, bowtie, UCSC genome browser, Ensembl, and others. It builds on existing popular web ...

...In cell-free expression systems, proteins are assembled in vitro using purified components of the transcription...Cell-free expression systems are ideal for fast assembly of more than one protein in one reaction. A major...advantage of these systems system is their ability to assemble proteins with labelled or modified amino acids...

...always a good idea to introduce yourself to a few members of your desired department during the application... Different platforms have different quirks, so remember to practice on the program you’ll be using for... be difficult. However, an online meeting with members of your desired program will allow for you to have...

...Jorgensen Lab recently developed a modular plasmid assembly toolkit called SapTrap to improve CRISPR genomic...SapTrap offers scientists a convenient one tube assembly reaction to generate high-throughput targeting...templates. A final ligation reaction correctly assembles the final targeting vector (Fig. 1, Step 4), and...

...VP2C fusion protein anchors to VP1, which self-assembles into a compartment encapsulating the protein of...contains a series of vectors and DNA modules for assembly of CRISPR/Cas9 constructs. zCas9i is a high efficiency...2A-Synaptophysin-mRuby from Liqun Luo’s lab expresses membrane tethered GFP to enhance axonal labeling and synaptophysin-tagged...

...it may benefit you to work as a team with other members of your lab, a lot of the “soft skills” required... In an academic environment, surrounded by lab members who are all working on related topics, scientific...will be part of a team in industry with most team members giving oral presentations, you will also have to...

... (nr/nt)” as it contains a composite of GenBank, EMBL, DDBJ, and PDB sequences and may be the most comprehensive...regions by default, meaning that you do not have to remember to adjust any blastp algorithm parameters. We ...http://www.expasy.org/genomics/sequence_alignment EMBL-EBI - http://www.ebi.ac.uk/services http://www....

...notebooks and computer files. If you asked your team members or colleagues: How much unpublished AAV data do...Therapy - Methods and Clinical Development, 18(September), 98–118. https://doi.org/10.1016/j.omtm.2020.05.018...Stimulation. Frontiers in Human Neuroscience, 14(December), 1–12. https://doi.org/10.3389/fnhum.2020.578687...

...figure above), which generates pores in the cell membrane, allowing for entry of the RNP into the cytoplasm...nucleofection, which forms pores in the nuclear membrane, allowing for entry of a DNA template. Other techniques...protoplasts and biolistic bombardment of immature embryos (Liang et al. 2017).  PEG-mediated methods, while...

... Blugene (check back on December 5 to learn more about this!). I’ve assembled a series of screenshots...search results to match your experimental needs. Remember, only filters with results will show up! Plasmid...

...compromising the photon budget. Likewise, the switch from ensemble imaging to single-molecule imaging places a greater...recently discovered that incorporation of four-membered azetidine rings could substantially enhance the...analogs without sacrificing their small size and membrane permeability (Figure 2c). These cell-permeable...

...data from the ENCODE project, find enhancers in embryonic stem cells, and conclude with a targeted CRISPR...for NANOG, an essential transcription factor in embryonic stem cells (ESCs). Your ChIP-seq finds just over...CRISPR screen. We start by infecting millions of embryonic stem cells (ESCs) with a lentiviral vector, an...

...development, complex genetic programs specify and assemble diverse arrays of neurons, forming the neuronal...subgenome-scale CRISPRa screening approach in embryonic stem (ES) cells to determine which transcription...gene-function relationships in the CNS using CRISPRa as a member of the Gelbard Laboratory at URMC.     References...

... The G·U wobble base pair. EMBO Rep 1:18–23 . https://doi.org/10.1093/embo-reports/kvd001 Additional resources...mammalian cells. This was the first codon optimized membrane protein expressed in mammalian cells. In this ...

...structures in RNA transcripts Effects on transcription (remember, it’s not all about translation - e.g. codon choice... isoacceptors induced by amino‐acid starvation." EMBO reports 6.2 (2005): 151-157. PubMed PMID: 15678157...transfer RNA abundance in Escherichia coli." The EMBO journal 9.13 (1990): 4359-4366. PubMed PMID: 2265611...

...for attendees and helping societies help their members get the most out of their meetings. Amanda Gunn...Gunn ran randomized coffee trials for us at ASCB|EMBO 2019, matching Mentors with Singletons for short coffee... a culture that brings more value to ALL their members.  Shoutout to our mentors and supporters Thanks...

... streptavidin-coated magnetic beads through an assembly of biotinylated SpyTag-SpyCatcher linkers and ...and target capture module (SpyTag-GFP nanobody) assembled on beads. C) Micrograph of H1.8-GFP nucleosomes...loss. Ci Ji Lim’s lab found that adding Late Embryogenesis Abundant (LEA) proteins, small proteins that...

...heads and long legs that protrude from the cell membrane, physically connecting the extracellular environment...the integrin, where it is resisted by the ligand embedded in the extracellular environment. This further...the extended open integrin conformation. During embryonic development, extended-open integrins enable tissue...

...devised a “Modular fluorescence unit fused with TRansmembrane region-to-IntrAcellular loop linkers” (MTRIA...they observe fluorescence localizes to the plasma membrane only when the RTK is activated and the ITAM phosphorylated...relies on a change in localization to the cell membrane and not a direct change in the fluorescent properties...