Tips for Using BLAST to Verify Plasmids
Type
Blog Post
Published
May 29, 2014, 1:29 p.m.
...fastest BLAST search to perform and will save you time compared to other types of BLAST searches.
If you ...: blastx searches are inherently slower than blastn or blastp, due to the additional searches involved...drastically reduce waiting time for search results.
Optimizing blastp searches
Depending on the sequencing result...Addgene, we continually use the Basic Local Alignment Search Tool (BLAST) provided by NCBI. BLAST helps us compare... programs, databases, and elements of the BLAST search pages.
At Addgene, we use blastn to identify any...into these differences below.
Optimizing blastn searches
On the Standard Nucleotide BLAST page, the first...sequences and may be the most comprehensive for searching.
Timesaving Tip #1: If you know the species that...