pSicoR Citations (59)

Originally described in: Cre-lox-regulated conditional RNA interference from transgenes.
Ventura A, Meissner A, Dillon CP, McManus M, Sharp PA, Van Parijs L, Jaenisch R, Jacks T Proc Natl Acad Sci U S A. 2004 Jul 13. 101(28):10380-5. PubMed Journal

---

Articles Citing pSicoR

Articles
Production of transgenic chickens from purified primordial germ cells infected with a lentiviral vector. Motono M, Yamada Y, Hattori Y, Nakagawa R, Nishijima K, Iijima S. J Biosci Bioeng. 2010 Apr;109(4):315-21. doi: 10.1016/j.jbiosc.2009.10.007. Epub 2009 Oct 29. PubMed
CDKL5, a protein associated with rett syndrome, regulates neuronal morphogenesis via Rac1 signaling. Chen Q, Zhu YC, Yu J, Miao S, Zheng J, Xu L, Zhou Y, Li D, Zhang C, Tao J, Xiong ZQ. J Neurosci. 2010 Sep 22;30(38):12777-86. doi: 10.1523/JNEUROSCI.1102-10.2010. PubMed
Endothelial cells create a stem cell niche in glioblastoma by providing NOTCH ligands that nurture self-renewal of cancer stem-like cells. Zhu TS, Costello MA, Talsma CE, Flack CG, Crowley JG, Hamm LL, He X, Hervey-Jumper SL, Heth JA, Muraszko KM, DiMeco F, Vescovi AL, Fan X. Cancer Res. 2011 Sep 15;71(18):6061-72. doi: 10.1158/0008-5472.CAN-10-4269. Epub 2011 Jul 25. PubMed
Local application of neurotrophins specifies axons through inositol 1,4,5-trisphosphate, calcium, and Ca2+/calmodulin-dependent protein kinases. Nakamuta S, Funahashi Y, Namba T, Arimura N, Picciotto MR, Tokumitsu H, Soderling TR, Sakakibara A, Miyata T, Kamiguchi H, Kaibuchi K. Sci Signal. 2011 Nov 15;4(199):ra76. doi: 10.1126/scisignal.2002011. PubMed
Lipid droplet-binding protein TIP47 regulates hepatitis C Virus RNA replication through interaction with the viral NS5A protein. Vogt DA, Camus G, Herker E, Webster BR, Tsou CL, Greene WC, Yen TS, Ott M. PLoS Pathog. 2013;9(4):e1003302. doi: 10.1371/journal.ppat.1003302. Epub 2013 Apr 11. PubMed
ERK2-mediated phosphorylation of Par3 regulates neuronal polarization. Funahashi Y, Namba T, Fujisue S, Itoh N, Nakamuta S, Kato K, Shimada A, Xu C, Shan W, Nishioka T, Kaibuchi K. J Neurosci. 2013 Aug 14;33(33):13270-85. doi: 10.1523/JNEUROSCI.4210-12.2013. PubMed
Enhanced lentiviral vector production in 293FT cells expressing Siglec-9. Shoji T, Higuchi H, Zaitsu Y, Nishijima KI, Iijima S. Cytotechnology. 2014 Jan 25. PubMed
Synergistic anticancer effects of Pam3CSK4 and Ara-C on B-cell lymphoma cells. Lee SK, Chwee JY, Ma CA, Le Bert N, Huang CW, Gasser S. Clin Cancer Res. 2014 Jul 1;20(13):3485-95. doi: 10.1158/1078-0432.CCR-13-2522. Epub 2014 May 5. PubMed
Xist repression shows time-dependent effects on the reprogramming of female somatic cells to induced pluripotent stem cells. Chen Q, Gao S, He W, Kou X, Zhao Y, Wang H, Gao S. Stem Cells. 2014 Oct;32(10):2642-56. doi: 10.1002/stem.1775. PubMed
StUbEx: Stable tagged ubiquitin exchange system for the global investigation of cellular ubiquitination. Akimov V, Henningsen J, Hallenborg P, Rigbolt KT, Jensen SS, Nielsen MM, Kratchmarova I, Blagoev B. J Proteome Res. 2014 Sep 5;13(9):4192-204. doi: 10.1021/pr500549h. Epub 2014 Aug 15. PubMed
Phosphorylation site dynamics of early T-cell receptor signaling. Chylek LA, Akimov V, Dengjel J, Rigbolt KT, Hu B, Hlavacek WS, Blagoev B. PLoS One. 2014 Aug 22;9(8):e104240. doi: 10.1371/journal.pone.0104240. eCollection 2014. PubMed
In vivo time-lapse imaging of mitochondria in healthy and diseased peripheral myelin sheath. Gonzalez S, Fernando R, Berthelot J, Perrin-Tricaud C, Sarzi E, Chrast R, Lenaers G, Tricaud N. Mitochondrion. 2015 Jul;23:32-41. doi: 10.1016/j.mito.2015.05.004. Epub 2015 May 29. PubMed
Pathogenicity of Bovine Neonatal Pancytopenia-associated vaccine-induced alloantibodies correlates with Major Histocompatibility Complex class I expression. Benedictus L, Luteijn RD, Otten H, Lebbink RJ, van Kooten PJ, Wiertz EJ, Rutten VP, Koets AP. Sci Rep. 2015 Aug 3;5:12748. doi: 10.1038/srep12748. PubMed
Prenatal beta-catenin/Brn2/Tbr2 transcriptional cascade regulates adult social and stereotypic behaviors. Belinson H, Nakatani J, Babineau BA, Birnbaum RY, Ellegood J, Bershteyn M, McEvilly RJ, Long JM, Willert K, Klein OD, Ahituv N, Lerch JP, Rosenfeld MG, Wynshaw-Boris A. Mol Psychiatry. 2016 Feb 2. doi: 10.1038/mp.2015.207. PubMed
Blocking mitochondrial calcium release in Schwann cells prevents demyelinating neuropathies. Gonzalez S, Berthelot J, Jiner J, Perrin-Tricaud C, Fernando R, Chrast R, Lenaers G, Tricaud N. J Clin Invest. 2016 Mar 1;126(3):1023-38. doi: 10.1172/JCI84505. Epub 2016 Feb 15. PubMed
Distribution of polymer nanoparticles by convection-enhanced delivery to brain tumors. Saucier-Sawyer JK, Seo YE, Gaudin A, Quijano E, Song E, Sawyer AJ, Deng Y, Huttner A, Saltzman WM. J Control Release. 2016 Jun 28;232:103-12. doi: 10.1016/j.jconrel.2016.04.006. Epub 2016 Apr 8. PubMed
Nuclear Phosphoproteomic Screen Uncovers ACLY as Mediator of IL-2-induced Proliferation of CD4+ T lymphocytes. Osinalde N, Mitxelena J, Sanchez-Quiles V, Akimov V, Aloria K, Arizmendi JM, Zubiaga AM, Blagoev B, Kratchmarova I. Mol Cell Proteomics. 2016 Jun;15(6):2076-92. doi: 10.1074/mcp.M115.057158. Epub 2016 Apr 11. PubMed
RNAi-mediated silencing of HLA A2 suppressed acute rejection against human fibroblast xenografts in the striatum of 6-OHDA lesioned rats. Liang C, Xu Y, Zheng D, Sun X, Xu Q, Duan D. J Neuroimmunol. 2016 Aug 15;297:28-37. doi: 10.1016/j.jneuroim.2016.05.002. Epub 2016 May 3. PubMed
Optimal myelin elongation relies on YAP activation by axonal growth and inhibition by Crb3/Hippo pathway. Fernando RN, Cotter L, Perrin-Tricaud C, Berthelot J, Bartolami S, Pereira JA, Gonzalez S, Suter U, Tricaud N. Nat Commun. 2016 Jul 20;7:12186. doi: 10.1038/ncomms12186. PubMed
Endoglin Is Essential for the Maintenance of Self-Renewal and Chemoresistance in Renal Cancer Stem Cells. Hu J, Guan W, Liu P, Dai J, Tang K, Xiao H, Qian Y, Sharrow AC, Ye Z, Wu L, Xu H. Stem Cell Reports. 2017 Aug 8;9(2):464-477. doi: 10.1016/j.stemcr.2017.07.009. PubMed
StUbEx PLUS-A Modified Stable Tagged Ubiquitin Exchange System for Peptide Level Purification and In-Depth Mapping of Ubiquitination Sites. Akimov V, Olsen LCB, Hansen SVF, Barrio-Hernandez I, Puglia M, Jensen SS, Solov'yov IA, Kratchmarova I, Blagoev B. J Proteome Res. 2018 Jan 5;17(1):296-304. doi: 10.1021/acs.jproteome.7b00566. Epub 2017 Nov 1. PubMed
Autophagy regulates testosterone synthesis by facilitating cholesterol uptake in Leydig cells. Gao F, Li G, Liu C, Gao H, Wang H, Liu W, Chen M, Shang Y, Wang L, Shi J, Xia W, Jiao J, Gao F, Li J, Chen L, Li W. J Cell Biol. 2018 Jun 4;217(6):2103-2119. doi: 10.1083/jcb.201710078. Epub 2018 Apr 4. PubMed
Jmy regulates oligodendrocyte differentiation via modulation of actin cytoskeleton dynamics. Azevedo MM, Domingues HS, Cordelieres FP, Sampaio P, Seixas AI, Relvas JB. Glia. 2018 Sep;66(9):1826-1844. doi: 10.1002/glia.23342. Epub 2018 May 6. PubMed
The influence of TAP1 and TAP2 gene polymorphisms on TAP function and its inhibition by viral immune evasion proteins. Praest P, Luteijn RD, Brak-Boer IGJ, Lanfermeijer J, Hoelen H, Ijgosse L, Costa AI, Gorham RD Jr, Lebbink RJ, Wiertz EJHJ. Mol Immunol. 2018 Sep;101:55-64. doi: 10.1016/j.molimm.2018.05.025. Epub 2018 Jun 4. PubMed
Data on mass spectrometry-based proteomics for studying the involvement of CYLD in the ubiquitination events downstream of EGFR activation. Sanchez-Quiles V, Osinalde N, Akimov V, Kratchmarova I, Blagoev B. Data Brief. 2018 Apr 25;18:1856-1863. doi: 10.1016/j.dib.2018.04.049. eCollection 2018 Jun. PubMed
Overexpression of Protein Kinase Inhibitor Alpha Reverses Rat Low Voluntary Running Behavior. Grigsby KB, Ruegsegger GN, Childs TE, Booth FW. Mol Neurobiol. 2019 Mar;56(3):1782-1797. doi: 10.1007/s12035-018-1171-0. Epub 2018 Jun 21. PubMed
Brain Somatic Mutations in MTOR Disrupt Neuronal Ciliogenesis, Leading to Focal Cortical Dyslamination. Park SM, Lim JS, Ramakrishina S, Kim SH, Kim WK, Lee J, Kang HC, Reiter JF, Kim DS, Kim HH, Lee JH. Neuron. 2018 Jul 11;99(1):83-97.e7. doi: 10.1016/j.neuron.2018.05.039. Epub 2018 Jun 21. PubMed
RbAp48 Protein Is a Critical Component of GPR158/OCN Signaling and Ameliorates Age-Related Memory Loss. Kosmidis S, Polyzos A, Harvey L, Youssef M, Denny CA, Dranovsky A, Kandel ER. Cell Rep. 2018 Oct 23;25(4):959-973.e6. doi: 10.1016/j.celrep.2018.09.077. PubMed
Genetic alteration of histone lysine methyltransferases and their significance in renal cell carcinoma. Yan L, Zhang Y, Ding B, Zhou H, Yao W, Xu H. PeerJ. 2019 Feb 6;7:e6396. doi: 10.7717/peerj.6396. eCollection 2019. PubMed
Cancer Stem Cell Marker Endoglin (CD105) Induces Epithelial Mesenchymal Transition (EMT) but Not Metastasis in Clear Cell Renal Cell Carcinoma. Hu J, Guan W, Yan L, Ye Z, Wu L, Xu H. Stem Cells Int. 2019 Mar 19;2019:9060152. doi: 10.1155/2019/9060152. eCollection 2019. PubMed
Mutant huntingtin enhances activation of dendritic Kv4 K(+) channels in striatal spiny projection neurons. Carrillo-Reid L, Day M, Xie Z, Melendez AE, Kondapalli J, Plotkin JL, Wokosin DL, Chen Y, Kress GJ, Kaplitt M, Ilijic E, Guzman JN, Chan CS, Surmeier DJ. Elife. 2019 Apr 24;8. pii: 40818. doi: 10.7554/eLife.40818. PubMed
Epigenetic regulation of mammalian Hedgehog signaling to the stroma determines the molecular subtype of bladder cancer. Kim S, Kim Y, Kong J, Kim E, Choi JH, Yuk HD, Lee H, Kim HR, Lee KH, Kang M, Roe JS, Moon KC, Kim S, Ku JH, Shin K. Elife. 2019 Apr 30;8. pii: 43024. doi: 10.7554/eLife.43024. PubMed
Lysosomal proteome analysis reveals that CLN3-defective cells have multiple enzyme deficiencies associated with changes in intracellular trafficking. Schmidtke C, Tiede S, Thelen M, Kakela R, Jabs S, Makrypidi G, Sylvester M, Schweizer M, Braren I, Brocke-Ahmadinejad N, Cotman SL, Schulz A, Gieselmann V, Braulke T. J Biol Chem. 2019 Jun 14;294(24):9592-9604. doi: 10.1074/jbc.RA119.008852. Epub 2019 Apr 30. PubMed
Tweety-homolog (Ttyh) Family Encodes the Pore-forming Subunits of the Swelling-dependent Volume-regulated Anion Channel (VRACswell) in the Brain. Han YE, Kwon J, Won J, An H, Jang MW, Woo J, Lee JS, Park MG, Yoon BE, Lee SE, Hwang EM, Jung JY, Park H, Oh SJ, Lee CJ. Exp Neurobiol. 2019 Apr;28(2):183-215. doi: 10.5607/en.2019.28.2.183. Epub 2019 Apr 30. PubMed
TTYH1 and TTYH2 Serve as LRRC8A-Independent Volume-Regulated Anion Channels in Cancer Cells. Bae Y, Kim A, Cho CH, Kim D, Jung HG, Kim SS, Yoo J, Park JY, Hwang EM. Cells. 2019 Jun 9;8(6). pii: cells8060562. doi: 10.3390/cells8060562. PubMed
Ultrasonic Neuromodulation via Astrocytic TRPA1. Oh SJ, Lee JM, Kim HB, Lee J, Han S, Bae JY, Hong GS, Koh W, Kwon J, Hwang ES, Woo DH, Youn I, Cho IJ, Bae YC, Lee S, Shim JW, Park JH, Lee CJ. Curr Biol. 2019 Oct 21;29(20):3386-3401.e8. doi: 10.1016/j.cub.2019.08.021. Epub 2019 Oct 3. PubMed
Establishment of xenografts of urological cancers on chicken chorioallantoic membrane (CAM) to study metastasis. Hu J, Ishihara M, Chin AI, Wu L. Precis Clin Med. 2019 Sep;2(3):140-151. doi: 10.1093/pcmedi/pbz018. Epub 2019 Oct 1. PubMed
TSPAN5 Enriched Microdomains Provide a Platform for Dendritic Spine Maturation through Neuroligin-1 Clustering. Moretto E, Longatti A, Murru L, Chamma I, Sessa A, Zapata J, Hosy E, Sainlos M, Saint-Pol J, Rubinstein E, Choquet D, Broccoli V, Schiavo G, Thoumine O, Passafaro M. Cell Rep. 2019 Oct 29;29(5):1130-1146.e8. doi: 10.1016/j.celrep.2019.09.051. PubMed
Culture, Manipulation, and Orthotopic Transplantation of Mouse Bladder Tumor Organoids. Kim Y, Lee J, Kim S, Shin K. J Vis Exp. 2020 Jan 31;(155). doi: 10.3791/60469. PubMed
Comparing Metastatic Clear Cell Renal Cell Carcinoma Model Established in Mouse Kidney and on Chicken Chorioallantoic Membrane. Ishihara M, Hu J, Zhang X, Choi Y, Wong A, Cano-Ruiz C, Zhao R, Tan P, Tso JL, Wu L. J Vis Exp. 2020 Feb 8;(156). doi: 10.3791/60314. PubMed
Transient Primary Cilia Mediate Robust Hedgehog Pathway-Dependent Cell Cycle Control. Ho EK, Tsai AE, Stearns T. Curr Biol. 2020 Jul 20;30(14):2829-2835.e5. doi: 10.1016/j.cub.2020.05.004. Epub 2020 Jun 11. PubMed
Altered RNA Splicing by Mutant p53 Activates Oncogenic RAS Signaling in Pancreatic Cancer. Escobar-Hoyos LF, Penson A, Kannan R, Cho H, Pan CH, Singh RK, Apken LH, Hobbs GA, Luo R, Lecomte N, Babu S, Pan FC, Alonso-Curbelo D, Morris JP 4th, Askan G, Grbovic-Huezo O, Ogrodowski P, Bermeo J, Saglimbeni J, Cruz CD, Ho YJ, Lawrence SA, Melchor JP, Goda GA, Bai K, Pastore A, Hogg SJ, Raghavan S, Bailey P, Chang DK, Biankin A, Shroyer KR, Wolpin BM, Aguirre AJ, Ventura A, Taylor B, Der CJ, Dominguez D, Kummel D, Oeckinghaus A, Lowe SW, Bradley RK, Abdel-Wahab O, Leach SD. Cancer Cell. 2020 Aug 10;38(2):198-211.e8. doi: 10.1016/j.ccell.2020.05.010. Epub 2020 Jun 18. PubMed
Single cell transcriptomics of human epidermis identifies basal stem cell transition states. Wang S, Drummond ML, Guerrero-Juarez CF, Tarapore E, MacLean AL, Stabell AR, Wu SC, Gutierrez G, That BT, Benavente CA, Nie Q, Atwood SX. Nat Commun. 2020 Aug 25;11(1):4239. doi: 10.1038/s41467-020-18075-7. PubMed
An evolutionarily acquired microRNA shapes development of mammalian cortical projections. Diaz JL, Siththanandan VB, Lu V, Gonzalez-Nava N, Pasquina L, MacDonald JL, Woodworth MB, Ozkan A, Nair R, He Z, Sahni V, Sarnow P, Palmer TD, Macklis JD, Tharin S. Proc Natl Acad Sci U S A. 2020 Nov 17;117(46):29113-29122. doi: 10.1073/pnas.2006700117. Epub 2020 Nov 2. PubMed
Bidirectional perisomatic inhibitory plasticity of a Fos neuronal network. Yap EL, Pettit NL, Davis CP, Nagy MA, Harmin DA, Golden E, Dagliyan O, Lin C, Rudolph S, Sharma N, Griffith EC, Harvey CD, Greenberg ME. Nature. 2021 Feb;590(7844):115-121. doi: 10.1038/s41586-020-3031-0. Epub 2020 Dec 9. PubMed
Spadin Modulates Astrocytic Passive Conductance via Inhibition of TWIK-1/TREK-1 Heterodimeric Channels. Bae Y, Choi JH, Ryoo K, Kim A, Kwon O, Jung HG, Hwang EM, Park JY. Int J Mol Sci. 2020 Dec 17;21(24). pii: ijms21249639. doi: 10.3390/ijms21249639. PubMed
PRMT1 is a novel molecular therapeutic target for clear cell renal cell carcinoma. Wang J, Wang C, Xu P, Li X, Lu Y, Jin D, Yin X, Jiang H, Huang J, Xiong H, Ye F, Jin J, Chen Y, Xie Y, Chen Z, Ding H, Zhang H, Liu R, Jiang H, Chen K, Yao Z, Luo C, Huang Y, Zhang Y, Zhang J. Theranostics. 2021 Mar 12;11(11):5387-5403. doi: 10.7150/thno.42345. eCollection 2021. PubMed
Periostin/Filamin-A: A Candidate Central Regulatory Axis for Valve Fibrogenesis and Matrix Compaction. Misra S, Ghatak S, Moreno-Rodriguez RA, Norris RA, Hascall VC, Markwald RR. Front Cell Dev Biol. 2021 Jun 3;9:649862. doi: 10.3389/fcell.2021.649862. eCollection 2021. PubMed
PRC1 and RACGAP1 are Diagnostic Biomarkers of Early HCC and PRC1 Drives Self-Renewal of Liver Cancer Stem Cells. Liao S, Wang K, Zhang L, Shi G, Wang Z, Chen Z, Zhu P, He Q. Front Cell Dev Biol. 2022 Apr 4;10:864051. doi: 10.3389/fcell.2022.864051. eCollection 2022. PubMed
CDK12 promotes tumorigenesis but induces vulnerability to therapies inhibiting folate one-carbon metabolism in breast cancer. Filippone MG, Gaglio D, Bonfanti R, Tucci FA, Ceccacci E, Pennisi R, Bonanomi M, Jodice G, Tillhon M, Montani F, Bertalot G, Freddi S, Vecchi M, Taglialatela A, Romanenghi M, Romeo F, Bianco N, Munzone E, Sanguedolce F, Vago G, Viale G, Di Fiore PP, Minucci S, Alberghina L, Colleoni M, Veronesi P, Tosoni D, Pece S. Nat Commun. 2022 May 12;13(1):2642. doi: 10.1038/s41467-022-30375-8. PubMed
Cell fate roadmap of human primed-to-naive transition reveals preimplantation cell lineage signatures. Bi Y, Tu Z, Zhou J, Zhu X, Wang H, Gao S, Wang Y. Nat Commun. 2022 Jun 7;13(1):3147. doi: 10.1038/s41467-022-30924-1. PubMed
Traumatic and Diabetic Schwann Cell Demyelination Is Triggered by a Transient Mitochondrial Calcium Release through Voltage Dependent Anion Channel 1. Tricaud N, Gautier B, Berthelot J, Gonzalez S, Van Hameren G. Biomedicines. 2022 Jun 19;10(6). pii: biomedicines10061447. doi: 10.3390/biomedicines10061447. PubMed
Transformed cells after senescence give rise to more severe tumor phenotypes than transformed non-senescent cells. Palazzo A, Hernandez-Vargas H, Goehrig D, Medard JJ, Vindrieux D, Flaman JM, Bernard D. Cancer Lett. 2022 Oct 10;546:215850. doi: 10.1016/j.canlet.2022.215850. Epub 2022 Aug 1. PubMed
Lumican, an Exerkine, Protects against Skeletal Muscle Loss. Cho HJ, Lee YS, Kim DA, Moon SA, Lee SE, Lee SH, Koh JM. Int J Mol Sci. 2022 Sep 2;23(17):10031. doi: 10.3390/ijms231710031. PubMed
m(6)A epitranscriptomic modification regulates neural progenitor-to-glial cell transition in the retina. Xin Y, He Q, Liang H, Zhang K, Guo J, Zhong Q, Chen D, Li J, Liu Y, Chen S. Elife. 2022 Dec 2;11:e79994. doi: 10.7554/eLife.79994. PubMed
Tumor heterogeneity in VHL drives metastasis in clear cell renal cell carcinoma. Hu J, Tan P, Ishihara M, Bayley NA, Schokrpur S, Reynoso JG, Zhang Y, Lim RJ, Dumitras C, Yang L, Dubinett SM, Jat PS, Van Snick J, Huang J, Chin AI, Prins RM, Graeber TG, Xu H, Wu L. Signal Transduct Target Ther. 2023 Apr 17;8(1):155. doi: 10.1038/s41392-023-01362-2. PubMed
Loss of SETD2-mediated downregulation of intracellular and exosomal miRNA-10b determines MAPK pathway activation and multidrug resistance in renal cancer. Yan L, Liu S, Sun G, Ding B, Wang Z, Li H. Mol Carcinog. 2023 Nov;62(11):1770-1781. doi: 10.1002/mc.23614. Epub 2023 Aug 17. PubMed
Primary cilia control oligodendrocyte precursor cell proliferation in white matter injury via Hedgehog-independent CREB signaling. Hoi KK, Xia W, Wei MM, Ulloa Navas MJ, Garcia Verdugo JM, Nachury MV, Reiter JF, Fancy SPJ. Cell Rep. 2023 Oct 31;42(10):113272. doi: 10.1016/j.celrep.2023.113272. Epub 2023 Oct 17. PubMed
Smurf1 polyubiquitinates on K285/K282 of the kinases Mst1/2 to attenuate their tumor-suppressor functions. Xu Y, Qu M, He Y, He Q, Shen T, Luo J, Tan D, Bao H, Xu C, Ji X, Hu X, Barkat MQ, Zeng LH, Wu X. J Biol Chem. 2023 Dec;299(12):105395. doi: 10.1016/j.jbc.2023.105395. Epub 2023 Oct 27. PubMed

If you have published an article using this material, please email us at to have your article added to this page.