pHAGE-mt-mKeima Citations (31)
Originally described in: Spatiotemporal Control of ULK1 Activation by NDP52 and TBK1 during Selective Autophagy.Vargas JNS, Wang C, Bunker E, Hao L, Maric D, Schiavo G, Randow F, Youle RJ Mol Cell. 2019 Apr 18;74(2):347-362.e6. doi: 10.1016/j.molcel.2019.02.010. Epub 2019 Mar 7. PubMed Journal
Articles Citing pHAGE-mt-mKeima
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| The 2016 revision of the World Health Organization classification of lymphoid neoplasms. Swerdlow SH, Campo E, Pileri SA, Harris NL, Stein H, Siebert R, Advani R, Ghielmini M, Salles GA, Zelenetz AD, Jaffe ES. Blood. 2016 May 19;127(20):2375-90. doi: 10.1182/blood-2016-01-643569. Epub 2016 Mar 15. PubMed |
| A Sensitive and Quantitative mKeima Assay for Mitophagy via FACS. Wang C. Curr Protoc Cell Biol. 2020 Mar;86(1):e99. doi: 10.1002/cpcb.99. PubMed |
| Neuronal mitochondria transport Pink1 mRNA via synaptojanin 2 to support local mitophagy. Harbauer AB, Hees JT, Wanderoy S, Segura I, Gibbs W, Cheng Y, Ordonez M, Cai Z, Cartoni R, Ashrafi G, Wang C, Perocchi F, He Z, Schwarz TL. Neuron. 2022 May 4;110(9):1516-1531.e9. doi: 10.1016/j.neuron.2022.01.035. Epub 2022 Feb 24. PubMed |
| MAPK15 protects from oxidative stress-dependent cellular senescence by inducing the mitophagic process. Franci L, Tubita A, Bertolino FM, Palma A, Cannino G, Settembre C, Rasola A, Rovida E, Chiariello M. Aging Cell. 2022 Jul;21(7):e13620. doi: 10.1111/acel.13620. Epub 2022 Jun 1. PubMed |
| Restoration of c-Src/Fyn Proteins Rescues Mitochondrial Dysfunction in Huntington's Disease. Fao L, Coelho P, Duarte L, Vilaca R, Hayden MR, Mota SI, Rego AC. Antioxid Redox Signal. 2022 Aug 5. doi: 10.1089/ars.2022.0001. PubMed |
| PINK1-Mediated Mitophagy Promotes Oxidative Phosphorylation and Redox Homeostasis to Induce Drug-Tolerant Persister Cancer Cells. Li Y, Chen H, Xie X, Yang B, Wang X, Zhang J, Qiao T, Guan J, Qiu Y, Huang YX, Tian D, Yao X, Lu D, Koeffler HP, Zhang Y, Yin D. Cancer Res. 2023 Feb 3;83(3):398-413. doi: 10.1158/0008-5472.CAN-22-2370. PubMed |
| The outer mitochondrial membrane protein TMEM11 demarcates spatially restricted BNIP3/BNIP3L-mediated mitophagy. Gok MO, Connor OM, Wang X, Menezes CJ, Llamas CB, Mishra P, Friedman JR. J Cell Biol. 2023 Apr 3;222(4):e202204021. doi: 10.1083/jcb.202204021. Epub 2023 Feb 16. PubMed |
| The ER membrane protein complex governs lysosomal turnover of a mitochondrial tail-anchored protein, BNIP3, to restrict mitophagy. Delgado JM, Wallace Shepard L, Lamson SW, Liu SL, Shoemaker CJ. bioRxiv [Preprint]. 2023 Mar 24:2023.03.22.533681. doi: 10.1101/2023.03.22.533681. PubMed |
PARK15/FBXO7 is dispensable for PINK1/Parkin mitophagy in iNeurons and HeLa cell systems.
Kraus F, Goodall EA, Smith IR, Jiang Y, Paoli JC, Adolf F, Zhang J, Paulo JA, Schulman BA, Harper JW.
EMBO Rep. 2023 Aug 3;24(8):e56399. doi: 10.15252/embr.202256399. Epub 2023 Jun 19.
PubMed
Associated Plasmids |
| Rev1 deficiency induces a metabolic shift in MEFs that can be manipulated by the NAD(+) precursor nicotinamide riboside. Anugula S, Li Z, Li Y, Hendriksen A, Christensen PB, Wang L, Monk JM, de Wind N, Bohr VA, Desler C, Naviaux RK, Rasmussen LJ. Heliyon. 2023 Jun 19;9(6):e17392. doi: 10.1016/j.heliyon.2023.e17392. eCollection 2023 Jun. PubMed |
| The SATB1-MIR22-GBA axis mediates glucocerebroside accumulation inducing a cellular senescence-like phenotype in dopaminergic neurons. Russo T, Kolisnyk B, Bs A, Kim TW, Martin J, Plessis-Belair J, Ni J, Pearson JA, Park EJ, Sher RB, Studer L, Riessland M. bioRxiv. 2023 Jul 21:2023.07.19.549710. doi: 10.1101/2023.07.19.549710. Preprint. PubMed |
| Anticancer activity of Bacopa monnieri through apoptosis induction and mitophagy-dependent NLRP3 inflammasome inhibition in oral squamous cell carcinoma. Mishra SR, Behera BP, Singh VK, Mahapatra KK, Mundkinajeddu D, Bhat D, Minz AM, Sethi G, Efferth T, Das S, Bhutia SK. Phytomedicine. 2024 Jan;123:155157. doi: 10.1016/j.phymed.2023.155157. Epub 2023 Oct 21. PubMed |
| The ER membrane protein complex restricts mitophagy by controlling BNIP3 turnover. Delgado JM, Shepard LW, Lamson SW, Liu SL, Shoemaker CJ. EMBO J. 2024 Jan;43(1):32-60. doi: 10.1038/s44318-023-00006-z. Epub 2023 Dec 15. PubMed |
| The SATB1-MIR22-GBA axis mediates glucocerebroside accumulation inducing a cellular senescence-like phenotype in dopaminergic neurons. Russo T, Kolisnyk B, B S A, Plessis-Belair J, Kim TW, Martin J, Ni J, Pearson JA, Park EJ, Sher RB, Studer L, Riessland M. Aging Cell. 2024 Apr;23(4):e14077. doi: 10.1111/acel.14077. Epub 2024 Feb 1. PubMed |
| Mitochondrial Calcium Transport During Autophagy Initiation. Chandra S, Katiyar P, Durairaj AS, Wang X. Mitochondrial Commun. 2024;2:14-20. doi: 10.1016/j.mitoco.2024.01.002. Epub 2024 Jan 28. PubMed |
| Proline restores mitochondrial function and reverses aging hallmarks in senescent cells. Choudhury D, Rong N, Senthil Kumar HV, Swedick S, Samuel RZ, Mehrotra P, Toftegaard J, Rajabian N, Thiyagarajan R, Podder AK, Wu Y, Shahini S, Seldeen KL, Troen B, Lei P, Andreadis ST. Cell Rep. 2024 Feb 27;43(2):113738. doi: 10.1016/j.celrep.2024.113738. Epub 2024 Feb 12. PubMed |
| NME3 is a gatekeeper for DRP1-dependent mitophagy in hypoxia. Chen CW, Su C, Huang CY, Huang XR, Cuili X, Chao T, Fan CH, Ting CW, Tsai YW, Yang KC, Yeh TY, Hsieh ST, Chen YJ, Feng Y, Hunter T, Chang ZF. Nat Commun. 2024 Mar 13;15(1):2264. doi: 10.1038/s41467-024-46385-7. PubMed |
| Opportunistic pathogen Porphyromonas gingivalis targets the LC3B-ceramide complex and mediates lethal mitophagy resistance in oral tumors. Sheridan M, Chowdhury N, Wellslager B, Oleinik N, Kassir MF, Lee HG, Engevik M, Peterson Y, Pandruvada S, Szulc ZM, Yilmaz O, Ogretmen B. iScience. 2024 Apr 30;27(6):109860. doi: 10.1016/j.isci.2024.109860. eCollection 2024 Jun 21. PubMed |
| MTFP1 controls mitochondrial fusion to regulate inner membrane quality control and maintain mtDNA levels. Tabara LC, Burr SP, Frison M, Chowdhury SR, Paupe V, Nie Y, Johnson M, Villar-Azpillaga J, Viegas F, Segawa M, Anand H, Petkevicius K, Chinnery PF, Prudent J. Cell. 2024 Jul 11;187(14):3619-3637.e27. doi: 10.1016/j.cell.2024.05.017. Epub 2024 Jun 7. PubMed |
| Arginine Methylation of DDX3 by PRMT1 Mediates Mitochondrial Homeostasis to Promote Breast Cancer Metastasis. Hsu WJ, Chiang MC, Chao YC, Chang YC, Hsu MC, Chung CH, Tsai IL, Chu CY, Wu HC, Yang CC, Lee CC, Lin CW. Cancer Res. 2024 Sep 16;84(18):3023-3043. doi: 10.1158/0008-5472.CAN-23-3829. PubMed |
| Sestrin2 drives ER-phagy in response to protein misfolding. De Leonibus C, Maddaluno M, Ferriero R, Besio R, Cinque L, Lim PJ, Palma A, De Cegli R, Gagliotta S, Montefusco S, Iavazzo M, Rohrbach M, Giunta C, Polishchuk E, Medina DL, Di Bernardo D, Forlino A, Piccolo P, Settembre C. Dev Cell. 2024 Aug 19;59(16):2035-2052.e10. doi: 10.1016/j.devcel.2024.07.004. Epub 2024 Aug 1. PubMed |
| ZFAND6 promotes TRAF2-dependent mitophagy to restrain cGAS-STING signaling. Shaikh K, Bowman M, McCormick SM, Gao L, Zhang J, White J, Tawil J, Kapoor A, Arav-Boger R, Norbury CC, Harhaj EW. iScience. 2024 Dec 6;28(1):111544. doi: 10.1016/j.isci.2024.111544. eCollection 2025 Jan 17. PubMed |
| Early tolerance and late persistence as alternative drug responses in cancer. Punzi S, Cittaro D, Gatti G, Crupi G, Botrugno OA, Cartalemi AA, Gutfreund A, Oneto C, Giansanti V, Battistini C, Santacatterina G, Patruno L, Villanti I, Palumbo M, Laverty DJ, Giannese F, Graudenzi A, Caravagna G, Antoniotti M, Nagel Z, Cavallaro U, Lanfrancone L, Yap TA, Draetta G, Balaban N, Tonon G. Nat Commun. 2025 Feb 3;16(1):1291. doi: 10.1038/s41467-024-54728-7. PubMed |
| HTLV-1 Tax induces PINK1-Parkin-dependent mitophagy to mitigate activation of the cGAS-STING pathway. Mohanty S, Suklabaidya S, Mnatsakanyan N, Jacobson S, Harhaj EW. bioRxiv [Preprint]. 2025 Mar 15:2025.03.15.643451. doi: 10.1101/2025.03.15.643451. PubMed |
| Repression of oxidative phosphorylation by NR2F2, MTERF3 and GDF15 in human skin under high-glucose stress. Ley-Ngardigal S, Claverol S, Sobilo L, Moreau M, Hubert C, Goupil J, Poulignon A, Mahfouf W, Fatrouni H, Dard L, Juan M, Gales L, Merched A, Tokarski C, Leblanc E, Galinier A, Lacombe D, Rezvani HR, Bellvert F, Pays K, Nizard C, Amoedo ND, Bulteau AL, Rossignol R. Redox Biol. 2025 May;82:103613. doi: 10.1016/j.redox.2025.103613. Epub 2025 Mar 27. PubMed |
| AIMP3 maintains cardiac homeostasis by regulating the editing activity of methionyl-tRNA synthetase. Das AS, Rabolli CP, Martens CR, Jiang HK, Zhang Y, Zimmer AA, Lin K, Baskin KK, Alfonzo JD, Accornero F. Nat Cardiovasc Res. 2025 Jul;4(7):876-890. doi: 10.1038/s44161-025-00670-w. Epub 2025 Jun 25. PubMed |
| ANKZF1 helps to eliminate stress-damaged mitochondria by LC3-mediated mitophagy. Ali M, Anjali, Mapa K. Cell Death Discov. 2025 Jul 29;11(1):349. doi: 10.1038/s41420-025-02638-y. PubMed |
| PABPC1 SUMOylation enhances cell survival by promoting mitophagy through stabilizing U-rich mRNAs within stress granules. Huang C, Huang J, Lu R, Yu AJ, Yu AS, Cao Y, Li L, Li J, Li H, Zhou Z, Zhang Y, Xu A, Chen R, Wang Y, Zhao X, Huang J, Fu Y, Xu M, Zhang H, Yu J. Nat Commun. 2025 Aug 7;16(1):7308. doi: 10.1038/s41467-025-62619-8. PubMed |
| Endocrine therapy induces oxidative stress in ER+ breast cancer that sensitizes persister cells to ferroptosis. Tau S, Friedman M, Roberts AM, Ferridge LR, Kleist SA, Cressey L, Kettenbach AN, Shoemaker CJ, Miller TW. bioRxiv [Preprint]. 2025 Jul 23:2025.07.18.665614. doi: 10.1101/2025.07.18.665614. PubMed |
| Leveraging BRG1 Driven Ferroptosis Resistance to Overcome Treatment Resistance. Hwang SY, Nikolli H, Yoval-Sanchez B, Yang S, Martin P, Gribbin C, Sehgal L, Alinari L, Baiocchi RA, Hwang I, Huang X, DiLiberto M, Galkin A, Kwak H, Chen-Kiang S, Zheng H, Paik J. bioRxiv [Preprint]. 2025 Sep 5:2025.09.02.673601. doi: 10.1101/2025.09.02.673601. PubMed |
A unified mechanism for mitochondrial damage sensing in PINK1-Parkin-mediated mitophagy.
Thayer JA, Petersen JD, Huang X, Gruel Budet LM, Hawrot J, Ramos DM, Sekine S, Li Y, Ward ME, Narendra DP.
EMBO J. 2025 Nov 20. doi: 10.1038/s44318-025-00604-z.
PubMed
Associated Plasmids |
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