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pICH47742::2x35S-5’UTR-hCas9(STOP)-NOST Citations (21)

Originally described in: Plant genome editing made easy: targeted mutagenesis in model and crop plants using the CRISPR/Cas system.
Belhaj K, Chaparro-Garcia A, Kamoun S, Nekrasov V Plant Methods. 2013 Oct 11;9(1):39.
PubMed Journal

Articles Citing pICH47742::2x35S-5’UTR-hCas9(STOP)-NOST

Efficient gene editing in tomato in the first generation using the clustered regularly interspaced short palindromic repeats/CRISPR-associated9 system. Brooks C, Nekrasov V, Lippman ZB, Van Eck J. Plant Physiol. 2014 Nov;166(3):1292-7. doi: 10.1104/pp.114.247577. Epub 2014 Sep 15. PubMed
Generation of chromosomal deletions in dicotyledonous plants employing a user-friendly genome editing toolkit. Ordon J, Gantner J, Kemna J, Schwalgun L, Reschke M, Streubel J, Boch J, Stuttmann J. Plant J. 2016 Aug 31. doi: 10.1111/tpj.13319. PubMed

Associated Plasmids

Fluorescence Amplification Method for Forward Genetic Discovery of Factors in Human mRNA Degradation. Alexandrov A, Shu MD, Steitz JA. Mol Cell. 2017 Jan 5;65(1):191-201. doi: 10.1016/j.molcel.2016.11.032. Epub 2016 Dec 22. PubMed

Associated Plasmids

Engineering Quantitative Trait Variation for Crop Improvement by Genome Editing. Rodriguez-Leal D, Lemmon ZH, Man J, Bartlett ME, Lippman ZB. Cell. 2017 Oct 5;171(2):470-480.e8. doi: 10.1016/j.cell.2017.08.030. Epub 2017 Sep 14. PubMed
At-MINI ZINC FINGER2 and Sl-INHIBITOR OF MERISTEM ACTIVITY, a Conserved Missing Link in the Regulation of Floral Meristem Termination in Arabidopsis and Tomato. Bollier N, Sicard A, Leblond J, Latrasse D, Gonzalez N, Gevaudant F, Benhamed M, Raynaud C, Lenhard M, Chevalier C, Hernould M, Delmas F. Plant Cell. 2018 Jan;30(1):83-100. doi: 10.1105/tpc.17.00653. Epub 2018 Jan 3. PubMed
Using CRISPR/Cas9 genome editing in tomato to create a gibberellin-responsive dominant dwarf DELLA allele. Tomlinson L, Yang Y, Emenecker R, Smoker M, Taylor J, Perkins S, Smith J, MacLean D, Olszewski NE, Jones JDG. Plant Biotechnol J. 2019 Jan;17(1):132-140. doi: 10.1111/pbi.12952. Epub 2018 Jun 22. PubMed
A common genetic mechanism underlies morphological diversity in fruits and other plant organs. Wu S, Zhang B, Keyhaninejad N, Rodriguez GR, Kim HJ, Chakrabarti M, Illa-Berenguer E, Taitano NK, Gonzalo MJ, Diaz A, Pan Y, Leisner CP, Halterman D, Buell CR, Weng Y, Jansky SH, van Eck H, Willemsen J, Monforte AJ, Meulia T, van der Knaap E. Nat Commun. 2018 Nov 9;9(1):4734. doi: 10.1038/s41467-018-07216-8. PubMed
Characterization of CRISPR Mutants Targeting Genes Modulating Pectin Degradation in Ripening Tomato. Wang D, Samsulrizal NH, Yan C, Allcock NS, Craigon J, Blanco-Ulate B, Ortega-Salazar I, Marcus SE, Bagheri HM, Perez Fons L, Fraser PD, Foster T, Fray R, Knox JP, Seymour GB. Plant Physiol. 2019 Feb;179(2):544-557. doi: 10.1104/pp.18.01187. Epub 2018 Nov 20. PubMed
Glycosidase and glycan polymorphism control hydrolytic release of immunogenic flagellin peptides. Buscaill P, Chandrasekar B, Sanguankiattichai N, Kourelis J, Kaschani F, Thomas EL, Morimoto K, Kaiser M, Preston GM, Ichinose Y, van der Hoorn RAL. Science. 2019 Apr 12;364(6436). pii: 364/6436/eaav0748. doi: 10.1126/science.aav0748. PubMed
Evolution of metabolic novelty: A trichome-expressed invertase creates specialized metabolic diversity in wild tomato. Leong BJ, Lybrand DB, Lou YR, Fan P, Schilmiller AL, Last RL. Sci Adv. 2019 Apr 24;5(4):eaaw3754. doi: 10.1126/sciadv.aaw3754. eCollection 2019 Apr. PubMed
Cas9-mediated mutagenesis of potato starch-branching enzymes generates a range of tuber starch phenotypes. Tuncel A, Corbin KR, Ahn-Jarvis J, Harris S, Hawkins E, Smedley MA, Harwood W, Warren FJ, Patron NJ, Smith AM. Plant Biotechnol J. 2019 Apr 29. doi: 10.1111/pbi.13137. PubMed
Multiple Auxin-Response Regulators Enable Stability and Variability in Leaf Development. Israeli A, Capua Y, Shwartz I, Tal L, Meir Z, Levy M, Bar M, Efroni I, Ori N. Curr Biol. 2019 Jun 3;29(11):1746-1759.e5. doi: 10.1016/j.cub.2019.04.047. Epub 2019 May 16. PubMed
Evolution of a plant gene cluster in Solanaceae and emergence of metabolic diversity. Fan P, Wang P, Lou YR, Leong BJ, Moore BM, Schenck CA, Combs R, Cao P, Brandizzi F, Shiu SH, Last RL. Elife. 2020 Jul 2;9. pii: 56717. doi: 10.7554/eLife.56717. PubMed
Evolution of a guarded decoy protease and its receptor in solanaceous plants. Kourelis J, Malik S, Mattinson O, Krauter S, Kahlon PS, Paulus JK, van der Hoorn RAL. Nat Commun. 2020 Sep 2;11(1):4393. doi: 10.1038/s41467-020-18069-5. PubMed
CRISPR/Cas9-based precise excision of SlHyPRP1 domain(s) to obtain salt stress-tolerant tomato. Tran MT, Doan DTH, Kim J, Song YJ, Sung YW, Das S, Kim EJ, Son GH, Kim SH, Van Vu T, Kim JY. Plant Cell Rep. 2021 Jun;40(6):999-1011. doi: 10.1007/s00299-020-02622-z. Epub 2020 Oct 19. PubMed
CRISPR/Cas9-Mediated Generation of Pathogen-Resistant Tomato against Tomato Yellow Leaf Curl Virus and Powdery Mildew. Pramanik D, Shelake RM, Park J, Kim MJ, Hwang I, Park Y, Kim JY. Int J Mol Sci. 2021 Feb 13;22(4). pii: ijms22041878. doi: 10.3390/ijms22041878. PubMed
Conserved Opposite Functions in Plant Resistance to Biotrophic and Necrotrophic Pathogens of the Immune Regulator SRFR1. Son GH, Moon J, Shelake RM, Vuong UT, Ingle RA, Gassmann W, Kim JY, Kim SH. Int J Mol Sci. 2021 Jun 15;22(12). pii: ijms22126427. doi: 10.3390/ijms22126427. PubMed
In Vivo Rapid Investigation of CRISPR-Based Base Editing Components in Escherichia coli (IRI-CCE): A Platform for Evaluating Base Editing Tools and Their Components. Shelake RM, Pramanik D, Kim JY. Int J Mol Sci. 2022 Jan 20;23(3). pii: ijms23031145. doi: 10.3390/ijms23031145. PubMed
Improved Dual Base Editor Systems (iACBEs) for Simultaneous Conversion of Adenine and Cytosine in the Bacterium Escherichia coli. Shelake RM, Pramanik D, Kim JY. mBio. 2023 Feb 28;14(1):e0229622. doi: 10.1128/mbio.02296-22. Epub 2023 Jan 10. PubMed
The potential of metabolomics in assessing global compositional changes resulting from the application of CRISPR/Cas9 technologies. Drapal M, Enfissi EMA, Almeida J, Rapacz E, Nogueira M, Fraser PD. Transgenic Res. 2023 Aug;32(4):265-278. doi: 10.1007/s11248-023-00347-9. Epub 2023 May 11. PubMed
Mutational analysis of mechanosensitive ion channels in the carnivorous Venus flytrap plant. Procko C, Wong WM, Patel J, Mousavi SAR, Dabi T, Duque M, Baird L, Chalasani SH, Chory J. Curr Biol. 2023 Aug 7;33(15):3257-3264.e4. doi: 10.1016/j.cub.2023.06.048. Epub 2023 Jul 11. PubMed

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