pHD-DsRed Citations (51)
Originally described in: Highly specific and efficient CRISPR/Cas9-catalyzed homology-directed repair in Drosophila.Gratz SJ, Ukken FP, Rubinstein CD, Thiede G, Donohue LK, Cummings AM, O'Connor-Giles KM Genetics. 2014 Apr;196(4):961-71. doi: 10.1534/genetics.113.160713. Epub 2014 Jan 29. PubMed Journal
Articles Citing pHD-DsRed
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| CRISPR/Cas9 and genome editing in Drosophila. Bassett AR, Liu JL. J Genet Genomics. 2014 Jan 20;41(1):7-19. doi: 10.1016/j.jgg.2013.12.004. Epub 2013 Dec 18. PubMed |
| Combining the auxin-inducible degradation system with CRISPR/Cas9-based genome editing for the conditional depletion of endogenous Drosophila melanogaster proteins. Bence M, Jankovics F, Lukacsovich T, Erdelyi M. FEBS J. 2017 Apr;284(7):1056-1069. doi: 10.1111/febs.14042. Epub 2017 Mar 8. PubMed |
| SLC46 Family Transporters Facilitate Cytosolic Innate Immune Recognition of Monomeric Peptidoglycans. Paik D, Monahan A, Caffrey DR, Elling R, Goldman WE, Silverman N. J Immunol. 2017 Jul 1;199(1):263-270. doi: 10.4049/jimmunol.1600409. Epub 2017 May 24. PubMed |
| Activation of the Notch Signaling Pathway In Vivo Elicits Changes in CSL Nuclear Dynamics. Gomez-Lamarca MJ, Falo-Sanjuan J, Stojnic R, Abdul Rehman S, Muresan L, Jones ML, Pillidge Z, Cerda-Moya G, Yuan Z, Baloul S, Valenti P, Bystricky K, Payre F, O'Holleran K, Kovall R, Bray SJ. Dev Cell. 2018 Mar 12;44(5):611-623.e7. doi: 10.1016/j.devcel.2018.01.020. Epub 2018 Feb 22. PubMed |
| The VAChTY49N mutation provides insecticide-resistance but perturbs evoked cholinergic neurotransmission in Drosophila. Vernon SW, Goodchild J, Baines RA. PLoS One. 2018 Sep 11;13(9):e0203852. doi: 10.1371/journal.pone.0203852. eCollection 2018. PubMed |
| Boundaries mediate long-distance interactions between enhancers and promoters in the Drosophila Bithorax complex. Postika N, Metzler M, Affolter M, Muller M, Schedl P, Georgiev P, Kyrchanova O. PLoS Genet. 2018 Dec 12;14(12):e1007702. doi: 10.1371/journal.pgen.1007702. eCollection 2018 Dec. PubMed |
| A Developmental Program Truncates Long Transcripts to Temporally Regulate Cell Signaling. Sandler JE, Irizarry J, Stepanik V, Dunipace L, Amrhein H, Stathopoulos A. Dev Cell. 2018 Dec 17;47(6):773-784.e6. doi: 10.1016/j.devcel.2018.11.019. PubMed |
| A Poly-Glutamine Region in the Drosophila VAChT Dictates Fill-Level of Cholinergic Synaptic Vesicles. Vernon SW, Goodchild J, Baines RA. eNeuro. 2019 Mar 4;6(1). pii: eN-NWR-0477-18. doi: 10.1523/ENEURO.0477-18.2019. eCollection 2019 Jan-Feb. PubMed |
| X chromosome and autosomal recombination are differentially sensitive to disruptions in SC maintenance. Billmyre KK, Cahoon CK, Heenan GM, Wesley ER, Yu Z, Unruh JR, Takeo S, Hawley RS. Proc Natl Acad Sci U S A. 2019 Oct 22;116(43):21641-21650. doi: 10.1073/pnas.1910840116. Epub 2019 Sep 30. PubMed |
| Drosulfakinin signaling in fruitless circuitry antagonizes P1 neurons to regulate sexual arousal in Drosophila. Wu S, Guo C, Zhao H, Sun M, Chen J, Han C, Peng Q, Qiao H, Peng P, Liu Y, Luo SD, Pan Y. Nat Commun. 2019 Oct 18;10(1):4770. doi: 10.1038/s41467-019-12758-6. PubMed |
| The Daisho Peptides Mediate Drosophila Defense Against a Subset of Filamentous Fungi. Cohen LB, Lindsay SA, Xu Y, Lin SJH, Wasserman SA. Front Immunol. 2020 Jan 23;11:9. doi: 10.3389/fimmu.2020.00009. eCollection 2020. PubMed |
| The insulator functions of the Drosophila polydactyl C2H2 zinc finger protein CTCF: Necessity versus sufficiency. Kyrchanova O, Maksimenko O, Ibragimov A, Sokolov V, Postika N, Lukyanova M, Schedl P, Georgiev P. Sci Adv. 2020 Mar 25;6(13):eaaz3152. doi: 10.1126/sciadv.aaz3152. eCollection 2020 Mar. PubMed |
| Using RNA Tags for Multicolor Live Imaging of Chromatin Loci and Transcription in Drosophila Embryos. Chen H, Gregor T. Methods Mol Biol. 2020;2166:373-384. doi: 10.1007/978-1-0716-0712-1_22. PubMed |
| Gene editing reveals obligate and modulatory components of the CO(2) receptor complex in the malaria vector mosquito, Anopheles coluzzii. Liu F, Ye Z, Baker A, Sun H, Zwiebel LJ. Insect Biochem Mol Biol. 2020 Dec;127:103470. doi: 10.1016/j.ibmb.2020.103470. Epub 2020 Sep 20. PubMed |
| Mutagenesis of the orco odorant receptor co-receptor impairs olfactory function in the malaria vector Anopheles coluzzii. Sun H, Liu F, Ye Z, Baker A, Zwiebel LJ. Insect Biochem Mol Biol. 2020 Dec;127:103497. doi: 10.1016/j.ibmb.2020.103497. Epub 2020 Nov 11. PubMed |
| fruitless tunes functional flexibility of courtship circuitry during development. Chen J, Jin S, Chen D, Cao J, Ji X, Peng Q, Pan Y. Elife. 2021 Jan 19;10. pii: 59224. doi: 10.7554/eLife.59224. PubMed |
| Mapping of functional elements of the Fab-6 boundary involved in the regulation of the Abd-B hox gene in Drosophila melanogaster. Postika N, Schedl P, Georgiev P, Kyrchanova O. Sci Rep. 2021 Feb 18;11(1):4156. doi: 10.1038/s41598-021-83734-8. PubMed |
| A KDM5-Prospero transcriptional axis functions during early neurodevelopment to regulate mushroom body formation. Hatch HAM, Belalcazar HM, Marshall OJ, Secombe J. Elife. 2021 Mar 17;10. pii: 63886. doi: 10.7554/eLife.63886. PubMed |
| Ammonium transporter AcAmt mutagenesis uncovers reproductive and physiological defects without impacting olfactory responses to ammonia in the malaria vector mosquito Anopheles coluzzii. Ye Z, Liu F, Ferguson ST, Baker A, Pitts RJ, Zwiebel LJ. Insect Biochem Mol Biol. 2021 Jul;134:103578. doi: 10.1016/j.ibmb.2021.103578. Epub 2021 Apr 30. PubMed |
| A developmental framework linking neurogenesis and circuit formation in the Drosophila CNS. Mark B, Lai SL, Zarin AA, Manning L, Pollington HQ, Litwin-Kumar A, Cardona A, Truman JW, Doe CQ. Elife. 2021 May 11;10. pii: 67510. doi: 10.7554/eLife.67510. PubMed |
| An ammonium transporter is a non-canonical olfactory receptor for ammonia. Vulpe A, Kim HS, Ballou S, Wu ST, Grabe V, Nava Gonzales C, Liang T, Sachse S, Jeanne JM, Su CY, Menuz K. Curr Biol. 2021 Aug 9;31(15):3382-3390.e7. doi: 10.1016/j.cub.2021.05.025. Epub 2021 Jun 9. PubMed |
| An autoinhibitory clamp of actin assembly constrains and directs synaptic endocytosis. Del Signore SJ, Kelley CF, Messelaar EM, Lemos T, Marchan MF, Ermanoska B, Mund M, Fai TG, Kaksonen M, Rodal AA. Elife. 2021 Jul 29;10. pii: 69597. doi: 10.7554/eLife.69597. PubMed |
| Cholecystokinin-like peptide mediates satiety by inhibiting sugar attraction. Guo D, Zhang YJ, Zhang S, Li J, Guo C, Pan YF, Zhang N, Liu CX, Jia YL, Li CY, Ma JY, Nassel DR, Gao CF, Wu SF. PLoS Genet. 2021 Aug 16;17(8):e1009724. doi: 10.1371/journal.pgen.1009724. eCollection 2021 Aug. PubMed |
| The 3'UTR of the Drosophila CPEB translation factor gene orb2 plays a crucial role in spermatogenesis. Gilmutdinov R, Kozlov EN, Yakovlev KV, Olenina LV, Kotov AA, Barr J, Zhukova M, Schedl P, Shidlovskii YV. Development. 2021 Sep 1;148(17). pii: 272122. doi: 10.1242/dev.198788. Epub 2021 Sep 9. PubMed |
| Redundant enhancers in the iab-5 domain cooperatively activate Abd-B in the A5 and A6 abdominal segments of Drosophila. Postika N, Schedl P, Georgiev P, Kyrchanova O. Development. 2021 Oct 1;148(19). pii: 272019. doi: 10.1242/dev.199827. Epub 2021 Sep 24. PubMed |
| The decoy SNARE Tomosyn sets tonic versus phasic release properties and is required for homeostatic synaptic plasticity. Sauvola CW, Akbergenova Y, Cunningham KL, Aponte-Santiago NA, Littleton JT. Elife. 2021 Oct 29;10. pii: 72841. doi: 10.7554/eLife.72841. PubMed |
A DREaMR system to simplify combining mutations with rescue transgenes in Aedes aegypti.
Chen J, Luo J, Gurav AS, Chen Z, Wang Y, Montell C.
Genetics. 2021 Nov 5;219(3). pii: 6368066. doi: 10.1093/genetics/iyab146.
PubMed
Associated Plasmids |
| Multivalent interactions make adherens junction-cytoskeletal linkage robust during morphogenesis. Perez-Vale KZ, Yow KD, Johnson RI, Byrnes AE, Finegan TM, Slep KC, Peifer M. J Cell Biol. 2021 Dec 6;220(12). pii: 212790. doi: 10.1083/jcb.202104087. Epub 2021 Nov 11. PubMed |
| Tissue-specific regulation of translational readthrough tunes functions of the traffic jam transcription factor. Karki P, Carney TD, Maracci C, Yatsenko AS, Shcherbata HR, Rodnina MV. Nucleic Acids Res. 2022 Jun 24;50(11):6001-6019. doi: 10.1093/nar/gkab1189. PubMed |
| The Piragua Gene Is not Essential for Drosophila Development. Sokolov VV, Georgiev PG, Kyrchanova OV. Dokl Biol Sci. 2021 Nov;501(1):197-200. doi: 10.1134/S0012496621060089. Epub 2021 Dec 28. PubMed |
| Discrete roles of Ir76b ionotropic coreceptor impact olfaction, blood feeding, and mating in the malaria vector mosquito Anopheles coluzzii. Ye Z, Liu F, Sun H, Ferguson ST, Baker A, Ochieng SA, Zwiebel LJ. Proc Natl Acad Sci U S A. 2022 Jun 7;119(23):e2112385119. doi: 10.1073/pnas.2112385119. Epub 2022 Jun 1. PubMed |
| Function of Transient Receptor Potential-Like Channel in Insect Egg Laying. Zhang Y, Zhang YJ, Guo D, Wang LX, Niu CD, Wu SF, Zhang YV, Gao CF. Front Mol Neurosci. 2022 Jun 30;15:823563. doi: 10.3389/fnmol.2022.823563. eCollection 2022. PubMed |
| Selective endocytosis controls slit diaphragm maintenance and dynamics in Drosophila nephrocytes. Lang K, Milosavljevic J, Heinkele H, Chen M, Gerstner L, Spitz D, Kayser S, Helmstadter M, Walz G, Kottgen M, Spracklen A, Poulton J, Hermle T. Elife. 2022 Jul 25;11:e79037. doi: 10.7554/eLife.79037. PubMed |
| A neurogenetic mechanism of experience-dependent suppression of aggression. Ishii K, Cortese M, Leng X, Shokhirev MN, Asahina K. Sci Adv. 2022 Sep 9;8(36):eabg3203. doi: 10.1126/sciadv.abg3203. Epub 2022 Sep 7. PubMed |
| A glutamate receptor C-tail recruits CaMKII to suppress retrograde homeostatic signaling. Perry S, Han Y, Qiu C, Chien C, Goel P, Nishimura S, Sajnani M, Schmid A, Sigrist SJ, Dickman D. Nat Commun. 2022 Dec 10;13(1):7656. doi: 10.1038/s41467-022-35417-9. PubMed |
| Drosophila Tachykininergic Neurons Modulate the Activity of Two Groups of Receptor-Expressing Neurons to Regulate Aggressive Tone. Wohl MP, Liu J, Asahina K. J Neurosci. 2023 May 10;43(19):3394-3420. doi: 10.1523/JNEUROSCI.1734-22.2023. Epub 2023 Mar 28. PubMed |
| Modulation of transcription burst amplitude underpins dosage compensation in the Drosophila embryo. Forbes Beadle L, Zhou H, Rattray M, Ashe HL. Cell Rep. 2023 Apr 25;42(4):112382. doi: 10.1016/j.celrep.2023.112382. Epub 2023 Apr 14. PubMed |
| A cis-regulatory sequence of the selector gene vestigial drives the evolution of wing scaling in Drosophila species. Farfan-Pira KJ, Martinez-Cuevas TI, Evans TA, Nahmad M. J Exp Biol. 2023 May 15;226(10):jeb244692. doi: 10.1242/jeb.244692. Epub 2023 May 18. PubMed |
| The Drosophila chemokine-like Orion bridges phosphatidylserine and Draper in phagocytosis of neurons. Ji H, Wang B, Shen Y, Labib D, Lei J, Chen X, Sapar M, Boulanger A, Dura JM, Han C. Proc Natl Acad Sci U S A. 2023 Jun 13;120(24):e2303392120. doi: 10.1073/pnas.2303392120. Epub 2023 Jun 5. PubMed |
| Boundary Bypass Activity in the Abdominal-B Region of the Drosophila Bithorax Complex is Position Dependent and Regulated. Kyrchanova O, Ibragimov A, Postika N, Georgiev P, Schedl P. bioRxiv. 2023 Jun 7:2023.06.06.543971. doi: 10.1101/2023.06.06.543971. Preprint. PubMed |
| Stochastic RNA editing of the Complexin C-terminus within single neurons regulates neurotransmitter release. Brija EA, Guan Z, Jetti SK, Littleton JT. bioRxiv. 2023 May 30:2023.05.30.542887. doi: 10.1101/2023.05.30.542887. Preprint. PubMed |
| lncRNA read-through regulates the BX-C insulator Fub-1. Ibragimov A, Bing XY, Shidlovskii YV, Levine M, Georgiev P, Schedl P. Elife. 2023 Aug 10;12:e84711. doi: 10.7554/eLife.84711. PubMed |
| Stochastic RNA editing of the Complexin C-terminus within single neurons regulates neurotransmitter release. Brija EA, Guan Z, Jetti SK, Littleton JT. Cell Rep. 2023 Sep 26;42(9):113152. doi: 10.1016/j.celrep.2023.113152. Epub 2023 Sep 19. PubMed |
| A PRE loop at the dac locus acts as a topological chromatin structure that restricts and specifies enhancer-promoter communication. Denaud S, Bardou M, Papadopoulos GL, Grob S, Di Stefano M, Sabaris G, Nollmann M, Schuettengruber B, Cavalli G. Nat Struct Mol Biol. 2024 Dec;31(12):1942-1954. doi: 10.1038/s41594-024-01375-7. Epub 2024 Aug 16. PubMed |
| Interchromosomal contacts between regulatory regions trigger stable transgenerational epigenetic inheritance in Drosophila. Fitz-James MH, Sabaris G, Sarkies P, Bantignies F, Cavalli G. Mol Cell. 2025 Feb 20;85(4):677-691.e6. doi: 10.1016/j.molcel.2024.11.021. Epub 2024 Dec 11. PubMed |
| The proximal enhancer of the snail gene mediates negative autoregulatory feedback in Drosophila melanogaster. Dunipace L, McGehee JM, Irizarry J, Stathopoulos A. Genetics. 2025 Jun 4;230(2):iyaf058. doi: 10.1093/genetics/iyaf058. PubMed |
| Spatiotemporal dynamics of NF-kappaB/Dorsal inhibitor IkappaBalpha/Cactus in Drosophila blastoderm embryos. Schloop AE, Hiremath SV, Shaikh R, Dima SS, Lizardo L, Bhakta A, Williams CM, Reeves GT. iScience. 2025 Jun 9;28(7):112854. doi: 10.1016/j.isci.2025.112854. eCollection 2025 Jul 18. PubMed |
| The small GTPase Ran defines nuclear pore complex asymmetry. Sachweh J, Bormel M, Klumpe S, Becker A, Taniguchi R, Kubanska MA, Pintschovius V, Kaindl E, Plitzko JM, Wilfling F, Beck M, Hampoelz B. Cell. 2025 Oct 16;188(21):5931-5946.e16. doi: 10.1016/j.cell.2025.07.025. Epub 2025 Aug 18. PubMed |
| Fer3 is uniquely expressed in NotchOFF hemilineages, where it promotes interneuron identity. Drake KC, Lai SL, Doe CQ. Development. 2025 Nov 15;152(22):dev205118. doi: 10.1242/dev.205118. Epub 2025 Nov 14. PubMed |
| Peripheral glia and neurons jointly regulate activity-induced synaptic remodeling at the Drosophila neuromuscular junction. Chang YC, Peng YJ, Lee JY, Wen A, Chang KT. Elife. 2025 Nov 21;14:RP104126. doi: 10.7554/eLife.104126. PubMed |
| Vnd and En are expressed in orthogonal stripes and act in a brief competence window to combinatorially specify NB7-1 and its early lineage. Anderson NLQ, Lai SL, Doe CQ. Dev Biol. 2026 Apr;532:73-82. doi: 10.1016/j.ydbio.2026.01.008. Epub 2026 Jan 14. PubMed |
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