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pCas Citations (35)

Plasmid Article: Multigene editing in the Escherichia coli genome using the CRISPR-Cas9 system.
Jiang Y, Chen B, Duan C, Sun B, Yang J, Yang S Appl Environ Microbiol. 2015 Jan 30. pii: AEM.04023-14.
PubMed Journal

Articles Citing pCas

Growth rate control of flagellar assembly in Escherichia coli strain RP437. Sim M, Koirala S, Picton D, Strahl H, Hoskisson PA, Rao CV, Gillespie CS, Aldridge PD. Sci Rep. 2017 Jan 24;7:41189. doi: 10.1038/srep41189. PubMed
Identification of an operon involved in fluoride resistance in Enterobacter cloacae FRM. Liu X, Tian J, Liu L, Zhu T, Yu X, Chu X, Yao B, Wu N, Fan Y. Sci Rep. 2017 Jul 28;7(1):6786. doi: 10.1038/s41598-017-06988-1. PubMed
Making point mutations in Escherichia coli BL21 genome using the CRISPR-Cas9 system. Wang X, He J, Le K. FEMS Microbiol Lett. 2018 Jul 1;365(14). pii: 4955551. doi: 10.1093/femsle/fny060. PubMed
Pooled CRISPR interference screening enables genome-scale functional genomics study in bacteria with superior performance. Wang T, Guan C, Guo J, Liu B, Wu Y, Xie Z, Zhang C, Xing XH. Nat Commun. 2018 Jun 26;9(1):2475. doi: 10.1038/s41467-018-04899-x. PubMed

Associated Plasmids

BREX system of Escherichia coli distinguishes self from non-self by methylation of a specific DNA site. Gordeeva J, Morozova N, Sierro N, Isaev A, Sinkunas T, Tsvetkova K, Matlashov M, Truncaite L, Morgan RD, Ivanov NV, Siksnys V, Zeng L, Severinov K. Nucleic Acids Res. 2019 Jan 10;47(1):253-265. doi: 10.1093/nar/gky1125. PubMed
Two-step pathway for isoprenoid synthesis. Chatzivasileiou AO, Ward V, Edgar SM, Stephanopoulos G. Proc Natl Acad Sci U S A. 2018 Dec 24. pii: 1812935116. doi: 10.1073/pnas.1812935116. PubMed

Associated Plasmids

Improving Cadmium Resistance in Escherichia coli Through Continuous Genome Evolution. Qin W, Zhao J, Yu X, Liu X, Chu X, Tian J, Wu N. Front Microbiol. 2019 Feb 20;10:278. doi: 10.3389/fmicb.2019.00278. eCollection 2019. PubMed
CRISPR/Cas9-mediated engineering of Escherichia coli for n-butanol production from xylose in defined medium. Abdelaal AS, Jawed K, Yazdani SS. J Ind Microbiol Biotechnol. 2019 Jul;46(7):965-975. doi: 10.1007/s10295-019-02180-8. Epub 2019 Apr 13. PubMed
AcrAB-TolC Inhibition by Peptide-Conjugated Phosphorodiamidate Morpholino Oligomers Restores Antibiotic Activity in Vitro and in Vivo. Sturge CR, Felder-Scott CF, Pifer R, Pybus C, Jain R, Geller BL, Greenberg DE. ACS Infect Dis. 2019 Aug 9;5(8):1446-1455. doi: 10.1021/acsinfecdis.9b00123. Epub 2019 Jun 11. PubMed
RNase G controls tpiA mRNA abundance in response to oxygen availability in Escherichia coli. Lee J, Lee DH, Jeon CO, Lee K. J Microbiol. 2019 Oct;57(10):910-917. doi: 10.1007/s12275-019-9354-6. Epub 2019 Sep 30. PubMed
Hydrogen Sulfide From Cysteine Desulfurase, Not 3-Mercaptopyruvate Sulfurtransferase, Contributes to Sustaining Cell Growth and Bioenergetics in E. coli Under Anaerobic Conditions. Wang J, Guo X, Li H, Qi H, Qian J, Yan S, Shi J, Niu W. Front Microbiol. 2019 Oct 11;10:2357. doi: 10.3389/fmicb.2019.02357. eCollection 2019. PubMed
Characterization of blaCTX-M-14 transposition from plasmid to chromosome in Escherichia coli experimental strain. Hamamoto K, Tokunaga T, Yagi N, Hirai I. Int J Med Microbiol. 2020 Feb;310(2):151395. doi: 10.1016/j.ijmm.2020.151395. Epub 2020 Jan 16. PubMed
Overexpression of AmpC Promotes Bacteriophage Lysis of Ampicillin-Resistant Escherichia coli. Wang S, Yin B, Yu L, Dang M, Guo Z, Yan G, Hu D, Gu J, Du C, Feng X, Han W, Adam YY, Sun C, Bosse JT, Lei L. Front Microbiol. 2020 Jan 8;10:2973. doi: 10.3389/fmicb.2019.02973. eCollection 2019. PubMed
Genetic editing of the virulence gene of Escherichia coli using the CRISPR system. Hou M, Sun S, Feng Q, Dong X, Zhang P, Shi B, Liu J, Shi D. PeerJ. 2020 Apr 6;8:e8881. doi: 10.7717/peerj.8881. eCollection 2020. PubMed
CRISPR-Cas9-mediated pinpoint microbial genome editing aided by target-mismatched sgRNAs. Lee HJ, Kim HJ, Lee SJ. Genome Res. 2020 May;30(5):768-775. doi: 10.1101/gr.257493.119. Epub 2020 Apr 23. PubMed
Real-time observation of CRISPR spacer acquisition by Cas1-Cas2 integrase. Budhathoki JB, Xiao Y, Schuler G, Hu C, Cheng A, Ding F, Ke A. Nat Struct Mol Biol. 2020 May;27(5):489-499. doi: 10.1038/s41594-020-0415-7. Epub 2020 May 4. PubMed
CRISPR-based curing and analysis of metabolic burden of cryptic plasmids in Escherichia coli Nissle 1917. Zainuddin HS, Bai Y, Mansell TJ. Eng Life Sci. 2019 Jun 3;19(6):478-485. doi: 10.1002/elsc.201900003. eCollection 2019 Jun. PubMed
Bacteria Modify Their Sensitivity to Chemerin-Derived Peptides by Hindering Peptide Association With the Cell Surface and Peptide Oxidation. Godlewska U, Bilska B, Majewski P, Pyza E, Zabel BA, Cichy J. Front Microbiol. 2020 Aug 11;11:1819. doi: 10.3389/fmicb.2020.01819. eCollection 2020. PubMed
The evolution of coexistence from competition in experimental co-cultures of Escherichia coli and Saccharomyces cerevisiae. Barber JN, Sezmis AL, Woods LC, Anderson TD, Voss JM, McDonald MJ. ISME J. 2021 Mar;15(3):746-761. doi: 10.1038/s41396-020-00810-z. Epub 2020 Oct 22. PubMed
Gene Knockout of Beneficial Plant-associated Bacillus spp. Using the CRISPR-Cas9 Double Plasmid System. Figueredo EF, Quecine MC. Methods Mol Biol. 2021;2232:173-191. doi: 10.1007/978-1-0716-1040-4_15. PubMed
Multi-Path Optimization for Efficient Production of 2'-Fucosyllactose in an Engineered Escherichia coli C41 (DE3) Derivative. Ni Z, Li Z, Wu J, Ge Y, Liao Y, Yuan L, Chen X, Yao J. Front Bioeng Biotechnol. 2020 Dec 3;8:611900. doi: 10.3389/fbioe.2020.611900. eCollection 2020. PubMed
Endoribonuclease-mediated control of hns mRNA stability constitutes a key regulatory pathway for Salmonella Typhimurium pathogenicity island 1 expression. Lee M, Ryu M, Joo M, Seo YJ, Lee J, Kim HM, Shin E, Yeom JH, Kim YH, Bae J, Lee K. PLoS Pathog. 2021 Feb 1;17(2):e1009263. doi: 10.1371/journal.ppat.1009263. eCollection 2021 Feb. PubMed
Genome editing by miniature CRISPR/Cas12f1 enzyme in Escherichia coli. Okano K, Sato Y, Hizume T, Honda K. J Biosci Bioeng. 2021 Aug;132(2):120-124. doi: 10.1016/j.jbiosc.2021.04.009. Epub 2021 May 19. PubMed

Associated Plasmids

An acquired acyltransferase promotes Klebsiella pneumoniae ST258 respiratory infection. Ahn D, Bhushan G, McConville TH, Annavajhala MK, Soni RK, Wong Fok Lung T, Hofstaedter CE, Shah SS, Chong AM, Castano VG, Ernst RK, Uhlemann AC, Prince A. Cell Rep. 2021 Jun 1;35(9):109196. doi: 10.1016/j.celrep.2021.109196. PubMed
Meningitic Escherichia coli alpha-hemolysin aggravates blood-brain barrier disruption via targeting TGFbeta1-triggered hedgehog signaling. Fu J, Li L, Huo D, Yang R, Yang B, Xu B, Yang X, Dai M, Tan C, Chen H, Wang X. Mol Brain. 2021 Jul 19;14(1):116. doi: 10.1186/s13041-021-00826-2. PubMed
Structure of Escherichia coli respiratory complex I reconstituted into lipid nanodiscs reveals an uncoupled conformation. Kolata P, Efremov RG. Elife. 2021 Jul 26;10. pii: 68710. doi: 10.7554/eLife.68710. PubMed
Insight into the AcrAB-TolC Complex Assembly Process Learned from Competition Studies. Rajapaksha P, Ojo I, Yang L, Pandeya A, Abeywansha T, Wei Y. Antibiotics (Basel). 2021 Jul 8;10(7). pii: antibiotics10070830. doi: 10.3390/antibiotics10070830. PubMed
Engineering Escherichia coli for highly efficient production of lacto-N-triose II from N-acetylglucosamine, the monomer of chitin. Hu D, Wu H, Zhu Y, Zhang W, Mu W. Biotechnol Biofuels. 2021 Oct 8;14(1):198. doi: 10.1186/s13068-021-02050-5. PubMed
Comparative Analyses of the Transcriptome and Proteome of Escherichia coli C321. big up tri, openA and Further Improving Its Noncanonical Amino Acids Containing Protein Expression Ability by Integration of T7 RNA Polymerase. Yi H, Zhang J, Ke F, Guo X, Yang J, Xie P, Liu L, Wang Q, Gao X. Front Microbiol. 2021 Sep 29;12:744284. doi: 10.3389/fmicb.2021.744284. eCollection 2021. PubMed
An orthogonal metabolic framework for one-carbon utilization. Chou A, Lee SH, Zhu F, Clomburg JM, Gonzalez R. Nat Metab. 2021 Oct;3(10):1385-1399. doi: 10.1038/s42255-021-00453-0. Epub 2021 Oct 21. PubMed
New Method for Genome-Scale Functional Genomic Study in Bacteria with Superior Performance: CRISPR Interference Screen. Liao X, Xing XH, Zhang C. Methods Mol Biol. 2022;2377:123-141. doi: 10.1007/978-1-0716-1720-5_7. PubMed
Metabolic engineering strategies of de novo pathway for enhancing 2'-fucosyllactose synthesis in Escherichia coli. Li M, Li C, Hu M, Zhang T. Microb Biotechnol. 2022 May;15(5):1561-1573. doi: 10.1111/1751-7915.13977. Epub 2021 Nov 29. PubMed
Engineering for an HPV 9-valent vaccine candidate using genomic constitutive over-expression and low lipopolysaccharide levels in Escherichia coli cells. Wang K, Zhou L, Chen T, Li Q, Li J, Liu L, Li Y, Sun J, Li T, Wang Y, Kong Z, Zheng Q, Zhang J, Yu H, Gu Y, Xia N, Li S. Microb Cell Fact. 2021 Dec 20;20(1):227. doi: 10.1186/s12934-021-01719-8. PubMed
Development of a TNF-alpha-mediated Trojan Horse for bacteria-based cancer therapy. Hu CW, Chang YC, Liu CH, Yu YA, Mou KY. Mol Ther. 2022 Jul 6;30(7):2522-2536. doi: 10.1016/j.ymthe.2022.04.008. Epub 2022 Apr 18. PubMed
Biosensor and chemo-enzymatic one-pot cascade applications to detect and transform PET-derived terephthalic acid in living cells. Bayer T, Pfaff L, Branson Y, Becker A, Wu S, Bornscheuer UT, Wei R. iScience. 2022 Apr 29;25(5):104326. doi: 10.1016/j.isci.2022.104326. eCollection 2022 May 20. PubMed

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