Systematic analysis of alternative exon-dependent interactome remodeling reveals multitasking functions of gene regulatory factors.
Roth JF, Braunschweig U, Wu M, Li JD, Lin ZY, Larsen B, Weatheritt RJ, Gingras AC, Blencowe BJ
Mol Cell. 2023 Dec 7;83(23):4222-4238.e10. doi: 10.1016/j.molcel.2023.10.034. PubMed Article
Roth JF, Braunschweig U, Wu M, Li JD, Lin ZY, Larsen B, Weatheritt RJ, Gingras AC, Blencowe BJ
Mol Cell. 2023 Dec 7;83(23):4222-4238.e10. doi: 10.1016/j.molcel.2023.10.034. PubMed Article
Plasmids from Article
| ID | Plasmid | Purpose |
|---|---|---|
| 212044 | 5'-3xFLAG minimal CMV pCDNA5 | LR destination vector for integration into N2a rtTA3 expressing cells with an FRT site in the Rosa26 locus |
| 212045 | 3'-3xFLAG minimal CMV pCDNA5 | LR destination vector for integration into N2a rtTA3 expressing cells with an FRT site in the Rosa26 locus |
| 212046 | 5'-BirA*-FLAG minimal CMV pCDNA5 | LR destination vector for integration into N2a rtTA3 expressing cells with an FRT site in the Rosa26 locus |
| 212047 | 3'-BirA*-FLAG minimal CMV pCDNA5 | LR destination vector for integration into N2a rtTA3 expressing cells with an FRT site in the Rosa26 locus |
| 212048 | 5'-3xFLAG Camta2-exon minimal CMV pCDNA5 | LR vector for integration of Camta2-exon into N2a FRT rtTA3 expression cells |
| 212049 | 5'-3xFLAG Camta2+exon minimal CMV pCDNA5 | LR vector for integration of Camta2+exon(21nt) into N2a FRT rtTA3 expression cells |
| 212050 | 5'-3xFLAG Gatad2a+exon minimal CMV pCDNA5 | LR vector for integration of Gatad2a+exon(75nt) into N2a FRT rtTA3 expression cells |
| 212051 | 5'-3xFLAG Gatad2a-exon minimal CMV pCDNA5 | LR vector for integration of Gatad2a-exon into N2a FRT rtTA3 expression cells |
| 212052 | 5'-3xFLAG Kansl3-exon minimal CMV pCDNA5 | LR vector for integration of Kansl3-exon into N2a FRT rtTA3 expression cells |
| 212053 | 5'-3xFLAG Kansl3+exon minimal CMV pCDNA5 | LR vector for integration of Kansl3+exon(78nt) into N2a FRT rtTA3 expression cells |
| 212054 | 5'-3xFLAG Kdm1a-exon minimal CMV pCDNA5 | LR vector for integration of Kdm1a-exon into N2a FRT rtTA3 expression cells |
| 212055 | 5'-3xFLAG Kdm1a+exon minimal CMV pCDNA5 | LR vector for integration of Kdm1a+exon(12nt) into N2a FRT rtTA3 expression cells |
| 212056 | 5'-3xFLAG Gse1-exon minimal CMV pCDNA5 | LR vector for integration of Gse1-exon into N2a FRT rtTA3 expression cells |
| 212057 | 5'-3xFLAG Gse1+exon minimal CMV pCDNA5 | LR vector for integration of Gse1+ex(108nt) into N2a FRT rtTA3 expression cells |
| 212058 | 5'-3xFLAG L3mbtl3-exon minimal CMV pCDNA5 | LR vector for integration of L3mbtl3-exon into N2a FRT rtTA3 expression cells |
| 212059 | 5'-3xFLAG L3mbtl3+exon minimal CMV pCDNA5 | LR vector for integration of L3mbtl3+exon(75nt) into N2a FRT rtTA3 expression cells |
| 212060 | 5'-3xFLAG Med24-exon minimal CMV pCDNA5 | LR vector for integration of Med24-exon into N2a FRT rtTA3 expression cells |
| 212061 | 5'-3xFLAG Med24+exon minimal CMV pCDNA5 | LR vector for integration of Med24+exon(57nt) into N2a FRT rtTA3 expression cells |
| 212062 | 5'-3xFLAG Mef2a-exon minimal CMV pCDNA5 | LR vector for integration of Mef2a-exon into N2a FRT rtTA3 expression cells |
| 212063 | 5'-3xFLAG Mef2a+exon minimal CMV pCDNA5 | LR vector for integration of Mef2a+exon(24nt) into N2a FRT rtTA3 expression cells |
| 212064 | 5'-3xFLAG Mef2d-exon minimal CMV pCDNA5 | LR vector for integration of Mef2d-exon into N2a FRT rtTA3 expression cells |
| 212065 | 5'-3xFLAG Mef2d+exon minimal CMV pCDNA5 | LR vector for integration of Mef2d+exon(21nt) into N2a FRT rtTA3 expression cells |
| 212066 | 5'-3xFLAG Mllt1-exon minimal CMV pCDNA5 | LR vector for integration of Mllt1-exon into N2a FRT rtTA3 expression cells |
| 212067 | 5'-3xFLAG Mllt1+exon minimal CMV pCDNA5 | LR vector for integration of Mllt1+exon(126nt) into N2a FRT rtTA3 expression cells |
| 212068 | 5'-3xFLAG Msl1-exon minimal CMV pCDNA5 | LR vector for integration of Msl1-exon into N2a FRT rtTA3 expression cells |
| 212069 | 5'-3xFLAG Msl1+exon minimal CMV pCDNA5 | LR vector for integration of Msl1+exon(48nt) into N2a FRT rtTA3 expression cells |
| 212070 | 5'-3xFLAG Mta1+exon minimal CMV pCDNA5 | LR vector for integration of Mta1+exon(12nt) into N2a FRT rtTA3 expression cells |
| 212071 | 5'-3xFLAG Mta1-exon minimal CMV pCDNA5 | LR vector for integration of Mta1-exon into N2a FRT rtTA3 expression cells |
| 212072 | 5'-3xFLAG Sap30bp-exon minimal CMV pCDNA5 | LR vector for integration of Sap30bp-exon into N2a FRT rtTA3 expression cells |
| 212073 | 5'-3xFLAG Sap30bp+exon minimal CMV pCDNA5 | LR vector for integration of Sap30bp+exon(48nt) into N2a FRT rtTA3 expression cells |
| 212074 | 5'-3xFLAG Smarcc2-exon minimal CMV pCDNA5 | LR vector for integration of Smarcc2-exon into N2a FRT rtTA3 expression cells |
| 212075 | 5'-3xFLAG Smarcc2+exon minimal CMV pCDNA5 | LR vector for integration of Smarcc2+exon(93nt) into N2a FRT rtTA3 expression cells |
| 212076 | 5'-3xFLAG Tcf12-exon minimal CMV pCDNA5 | LR vector for integration of Tcf12-exon into N2a FRT rtTA3 expression cells |
| 212077 | 5'-3xFLAG Tcf12+exon minimal CMV pCDNA5 | LR vector for integration of Tcf12+exon(72nt) into N2a FRT rtTA3 expression cells |
| 212078 | 5'-3xFLAG Zmynd8-exon minimal CMV pCDNA5 | LR vector for integration of Zmynd8-exon into N2a FRT rtTA3 expression cells |
| 212079 | 5'-3xFLAG Zmynd8+exon minimal CMV pCDNA5 | LR vector for integration of Zmynd8+exon(48nt) into N2a FRT rtTA3 expression cells |
| 212080 | 5'-3xFLAG Chtop-exon minimal CMV pCDNA5 | LR vector for integration of Chtop-exon into N2a FRT rtTA3 expression cells |
| 212081 | 5'-3xFLAG Chtop+exon minimal CMV pCDNA5 | LR vector for integration of Chtop+exon(138nt) into N2a FRT rtTA3 expression cells |
| 212082 | 5'-3xFLAG Chtop-exon_siResist minimal CMV pCDNA5 | LR vector for integration of Chtop-exon_siResist into N2a FRT rtTA3 expression cells |
| 212083 | 5'-3xFLAG Chtop+exon_siResist minimal CMV pCDNA5 | LR vector for integration of Chtop+exon(138nt)_siResist into N2a FRT rtTA3 expression cells |
| 212084 | 5'-3xFLAG Sap30bp-exon minimal CMV pCDNA5 | LR vector for integration of Sap30bp-exon_siResist into N2a FRT rtTA3 expression cells |
| 212085 | 5'-3xFLAG Sap30bp+exon_siResist minimal CMV pCDNA5 | LR vector for integration of Sap30bp+exon(48nt)_siResist into N2a FRT rtTA3 expression cells |
| 212086 | 5'-3xFLAG GFP minimal CMV pCDNA5 | LR vector for integration of GFP into N2a FRT rtTA3 expression cells |
| 212087 | 5'-BirA-FLAG GFP minimal CMV pCDNA5 | LR vector for integration of GFP into N2a FRT rtTA3 expression cells (BioID vector) |
| 212088 | 5'-BirA-FLAG Kdm1a-exon minimal CMV pCDNA5 | LR vector for integration of Kdm1a-exon into N2a FRT rtTA3 expression cells (BioID vector) |
| 212089 | 5'-BirA-FLAG Kdm1a+exon minimal CMV pCDNA5 | LR vector for integration of Kdm1a+exon(12nt) into N2a FRT rtTA3 expression cells (BioID vector) |
| 212090 | 5'-BirA-FLAG Chtop-exon minimal CMV pCDNA5 | LR vector for integration of Chtop-exon into N2a FRT rtTA3 expression cells (BioID vector) |
| 212091 | 5'-BirA-FLAG Chtop+exon minimal CMV pCDNA5 | LR vector for integration of Chtop+exon(138nt) into N2a FRT rtTA3 expression cells (BioID vector) |
| 212092 | 5'-BirA-FLAG Sap30bp-exon minimal CMV pCDNA5 | LR vector for integration of Sap30bp-exon into N2a FRT rtTA3 expression cells (BioID vector) |
| 212093 | 5'-BirA-FLAG Sap30bp+exon minimal CMV pCDNA5 | LR vector for integration of Sap30bp+exon(48nt) into N2a FRT rtTA3 expression cells (BioID vector) |