We narrowed to 55 results for: Chia
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TypeBlog Post... outperformed other 3D chromatin methods such as ChIA-PET or Hi-C, by increasing both the number of unique...
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Supporting Rare Disease Research with BeHeard 2017
TypeBlog Post...devastating afflictions. Elia Di Schiavi - Spinal muscular atrophy Dr. Elia Di Schiavi is a Research Scientist ...mechanisms behind the disease are unclear. Dr. Di Schiavi plans on using C. elegans as a model to identify...disruption. As part of his work in C. elegans, Dr. Di Schiavi will use Addgene plasmids to characterize smn1 ...behind SMN1 and its interaction partners, Dr. Di Schiavi will be able to better choose which genes and pathways...SMN1 and its partners in mouse cell lines. Dr. Di Schiavi hopes that these studies will accelerate the development...Website. We are proud to provide support to Drs Di Schiavi and Nabavi and will continue to work to help those... -
CRISPR Library Amplification
TypeProtocol...amplification of CRISPR pooled plasmid libraries in Escherichia coli cells....amplification of a pooled-plasmid library in Escherichia coli cells. Pooled libraries contain tens to ... -
Fluorescent Protein Travel Awards - Protein Variants, a Serotonin Sensor, and an Artificial Leaf Replica System
TypeBlog Post...Travel Awards: Melissa Chiasson, Elizabeth Unger, and Michal Bernach. Melissa Chiasson: Quantifying the abundance...time is time consuming and unscalable. Melissa Chiasson, a graduate student in Douglas Fowler's lab at...from each bin are then extracted and sequenced. Chiasson is currently using VAMP-seq to study vitamin K...scales and making personalized medicine a reality,” Chiasson explains. Elizabeth Unger: Developing a serotonin... -
Five Popular Model Organisms, Part 2
TypeBlog Post...organisms!) Escherichia coli One of the most recognizable and utilized model organisms is Escherichia coli. ...2017). Escherichia coli as a Model Organism and Its Application in Biotechnology. In Escherichia coli -...environments (Idalia & Bernardo, 2017). Escherichia coli. Image from NIAID. E. coli is often a... -
Plasmids 101: Modular Cloning Applications and Kits
TypeBlog Post...formerly known as Pichia pastoris). If your goal is protein isolation, then the MoClo Pichia Kit will get ...fungi, bacteria, protists, plants, and animals (Chiasson et al., 2019). Many plasmid elements such as promoters...Ulrike, et al. “A Modular Toolkit for Generating Pichia Pastoris Secretion Libraries.” ACS Synthetic Biology...Crossref, https://doi.org/10.1016/j.xgen.2024.100519. Chiasson, David, et al. “A Unified Multi-Kingdom Golden... -
Plasmids 101: Broad Host Range Plasmids
TypeBlog Post...vulgaris, Erwinia carotovora, E. chrysanthemi, Escherichia coli, Gluconacetobacter xylinus, Gluconobacter...E. herbicola, E. rubrifaciens, E. stewartii, Escherichia coli, Klebsiella spp., Legionella pneumophila...spp., Brucella spp., Caulobacter crescentus, Escherichia coli, Gluconacetobacter xylinus, Paracoccous ...integron promoter-based expression systems for Escherichia coli and Agrobacterium tumefaciens. 3 Biotech... -
Bacterial Toxin-antitoxin Systems as Molecular Biology Tools
TypeBlog Post...create unmarked genetic modifications in the yeast Pichia pastoris. By combining both positive and counter...first described by studies of EcoRI and Bsp6I in Escherichia coli in 1995 when introduction of restriction-modification..., Hanna Engelberg-Kulka, and Gad Glaser. "An Escherichia coli chromosomal" addiction module" regulated...counter-selectable marker for unmarked genetic modification of Pichia pastoris." FEMS yeast research 9.4 (2009): 600-... -
Three Tips for Preventing Viral Plasmid Recombination in Your Samples
TypeBlog Post...instability-prone lentiviral vector plasmid in Escherichia coli Stbl3. 3 Biotech 3:61–70. https://doi.org...lentiviral expression vectors using reduced-genomeEscherichia coli. BioTechniques 43:466–470. https://doi.org...cloning strategy for efficient genome editing in Escherichia coli. Microb Cell Fact 19. https://doi.org/10.1186... -
Synthetic Photobiology: Optogenetics for E. coli
TypeBlog Post...Refactoring and optimization of light-switchable Escherichia coli two-component systems. Schmidl SR, Sheth... at Addgene. Synthetic biology: engineering Escherichia coli to see light. Levskaya A, Chevalier AA, ...Multichromatic control of gene expression in Escherichia coli. Tabor JJ, Levskaya A, Voigt CA. J Mol Biol... -
Harnessing Bacterial Toxins for Allelic Exchange
TypeBlog Post...Matthew J., et al. "Toxic protein expression in Escherichia coli using a rhamnose-based tightly regulated...enables simplified chromosomal gene replacement in Escherichia coli." Appl. Environ. Microbiol. 81.15 (2015)...Recombineering) system for genome editing in Escherichia coli." Scientific reports 5 (2015): 15096. PubMed... -
Easing the Protein Purification Process with pCri
TypeBlog Post...Beyond E. coli: purifying from Bacillus subtilis and Pichia pastoris pCri also includes plasmids designed for...specifically the bacterium Bacillus subtilis and the yeast Pichia pastoris. The improved secretory capacities of ... -
CRISPR-based Genome Editing Systems For Editing in E. coli
TypeBlog Post...Yang J, Yang S (2015) Multigene Editing in the Escherichia coli Genome via the CRISPR-Cas9 System. Appl ...system for CRISPR-Cas9-assisted genome editing in Escherichia coli. Acta Biochimica et Biophysica Sinica. https... -
Plasmids 101: Codon usage bias
TypeBlog Post...rate dependence of transfer RNA abundance in Escherichia coli." The EMBO journal 9.13 (1990): 4359-4366...rate of full‐length human proteins expressed in Escherichia coli." Protein Science 19.7 (2010): 1312-1326... -
CRISPR 101: Targeting RNA with Cas13a (C2c2)
TypeBlog Post...single crRNA The Feng Zhang lab used Cas13a from Leptotrichia shahii (LshCas13a) to begin to characterize ...et al., 2017). They characterized Cas13a from Leptotrichia wadei (LwaCas13a), using a superfolder GFP fusion... -
Deciphering the Mysteries of Behavior with Viral Vectors
TypeBlog Post...levels in general, or anxiety associated with psychiatric diseases such as schizophrenia or bipolar disorder...the BDNF hypothesis of depression?." Molecular psychiatry 12.12 (2007): 1079. PubMed PMID: 17700574. Hare... -
Antibodies 101: Single Chain Fragment Variables (scFvs)
TypeBlog Post...anti-digoxin single-chain Fv analogue produced in Escherichia coli. Proceedings of the National Academy of ...A, Sivaccumar JP, Ruvo M (2020) Evolution of Escherichia coli Expression System in Producing Antibody ... -
Using Phosphoserine to Study Protein Phosphorylation
TypeBlog Post...-Sung, et al. "Expanding the genetic code of Escherichia coli with phosphoserine." Science 333.6046 (2011...al. "A flexible codon in genomically recoded Escherichia coli permits programmable protein phosphorylation... -
Lambda Red: A Homologous Recombination-based Technique for Genetic Engineering
TypeBlog Post...PMCID: PMC307639. 2. Daiguan Yu, Hilary M. Ellis, E-Chiang Lee, Nancy A. Jenkins, Neal G. Copeland, and Donald...recombination system for chromosome engineering in Escherichia coli. PNAS 2000 97 (11) 5978-5983; May 16, 2000... -
Rinehart Lab Phosphoprotein Reagents
TypeCollection... in: A flexible codon in genomically recoded Escherichia coli permits programmable protein phosphorylation... in: Enhanced phosphoserine insertion during Escherichia coli protein synthesis via partial UAG codon ... described in: Expanding the genetic code of Escherichia coli with phosphoserine. Park HS, Hohn MJ, Umehara... -
MassBioEd Career Exploration Day at Addgene
TypeBlog Post...from our Tech Transfer team members Tony Cova and Chiara DeNatale and programming with our Chief Architect... -
How Exercise Purges Stress and Keeps Depression at Bay
TypeBlog Post... for a variety of brain disorders, including psychiatric and cognitive conditions as well as neurodegenerative... -
Addgene's a Nonprofit? Nonprofit Awareness Day 2017
TypeBlog Post...Ben, Benoit, Bria, Brook, Bryan, Caroline, Cayla, Chiara, David, Diana, Dolly, Eddy, Emma, Eric, Gizela,... -
Plasmids 101: TOPO Cloning
TypeBlog Post...mediated by vaccinia virus DNA topoisomerase I in Escherichia coli is sequence specific." Proc Natl Acad Sci... -
Plasmids 101: Origin of Replication
TypeBlog Post...multiple-unnatural amino acid mutagenesis in Escherichia coli. Biochemistry. 2013 Mar 12;52(10):1828-37... -
Plasmids 101: A Brief History of Plasmids and an Improved eBook!
TypeBlog Post...and Esther M. Lederberg. “Sex Compatibility in Escherichia Coli.” Genetics 37.6 (1952): 720–730. PubMed ... -
Rewiring Metabolic Circuitry with CRISPR RNA Scaffolds [Video]
TypeBlog Post...the overexpression of various metabolites in Escherichia coli or Saccharomyces cerevisiae with few techniques... -
K. phaffii: Rising to the Occasion
TypeBlog Post...pharmaceutical companies is K. phaffii (formerly known as pichia). What is this new-fangled yeast? It’s actually... -
GCE4All: Making Genetic Code Expansion Accessible
TypeBlog Post...of Phosphoserine into Recombinant Proteins in Escherichia coli. 12(21). https://doi.org/10.21769/BioProtoc... -
Hot Plasmids - June 2019 - Optogenetics, Acoustic Reporter Genes, microRNAs, and the CRISPR-Cas9 system CHIME
TypeBlog Post...successfully visualized in vivo using ultrasound in Escherichia coli and Salmonella Typhimurium. This work demonstrates... -
Plasmid Tools for Microbiome Studies
TypeBlog Post...(MAGIC). With MAGIC, scientists introduce an Escherichia coli donor strain into the microbiome to deliver... -
Plasmids 101: Protein Expression
TypeBlog Post...Expression Systems Recombinant protein expression in Escherichia coli: advances and challenges Production of recombinant... -
Antibodies 101: Producing Recombinant Antibodies
TypeBlog Post...antibody production is Komagataella phaffii (a.k.a Pichia pastoris) because it secretes fewer of its own ... -
Plasmids 101: Choosing an Antibiotic Resistance Gene
TypeBlog Post..., P., & Berkmen, M. (2012). SHuffle, a novel Escherichia coli protein expression strain capable of correctly... -
Tips for Screening with Yeast Two Hybrid Systems
TypeBlog Post...gene fusions for analyzing gene expression in Escherichia coli and yeast. Methods Enzymol. 1983;100:293... -
Neuronal labeling with Spaghetti Monster
TypeBlog Post...streptavidin-binding strep-tag and, more recently, OLLAS (Escherichia coli OmpF linker and mouse langerin) and Sun ... -
Multiple Plasmids at a Low Price: Kits from Addgene
TypeBlog Post...purify proteins from E. coli, Bacillus subtilis, or Pichia pastoris depending upon your specific protein folding... -
Plasmids 101: Common Lab E. coli Strains
TypeBlog Post...process of replicating your new plasmid: the Escherichia coli bacteria. It’s hard to count the number ... -
CRISPR Plasmids - Empty gRNA Vectors
TypeCollection...Mammalian/Lentiviral BbsI none S. pyogenes Puro Ochiai pSB700 64046 Mammalian/Lentiviral none S. pyogenes...simultaneously repressing multiple target genes in Escherichia coli. Koffas Do you have suggestions for other... -
Plasmids 101: Dimers and Multimers
TypeBlog Post... harboring large inserts are often dimers in Escherichia coli K-12. Plasmid. 1989 Mar;21(2):138-41. doi... -
When Fidelity Matters: A frank discussion about ligase fidelity
TypeBlog Post...Thermus thermophilus DNA ligase, a homolog of Escherichia coli DNA ligase." Journal of bacteriology 173.16... -
Transferable Skills Guide: Teamwork
TypeBlog Post...knows how the physical kits are made and shipped; Chiara, the tech transfer expert who understands the somewhat... -
FLEx Technology and Optogenetics: Flipping the switch on gene expression with high spatial and temporal resolution
TypeBlog Post... and approaches for optogenetics." Biological psychiatry 71.12 (2012): 1033-1038. PubMed PMID: 22480664... -
CRISPR Methods for Bacteria: Genome Engineering, CRISPRa, CRISPRi, Base Editing, and More
TypeBlog Post...system for CRISPR-Cas9-assisted genome editing in Escherichia coli. Acta Biochimica et Biophysica Sinica. https... -
CRISPR Plasmids - Base Edit
TypeCollection...have been created by directed evolution of the Escherichia coli TadA, a tRNA adenine deaminase. Like cytosine... -
Open Enzyme Collection
TypeCollection...codon-optimized the Open Enzymes parts for expression in Escherichia coli bacteria. Researchers can use the collection... -
Rett Syndrome
TypeCollection...Methyl-CpG binding protein 2. Am J Med Genet B Neuropsychiatr Genet . 180, 55–67. PMID: 30536762 Shahbazian... -
Deisseroth INTRSECT Collection
TypeCollection...hypothalamus-habenula circuit controls aversion. Mol. Psychiatry 24(9):1351-1368. PubMed (Link opens in a new ... -
CRISPR History and Development for Genome Engineering
TypeCollection...for alkaline phosphatase isozyme conversion in Escherichia coli, and identification of the gene product.... -
Genomic Deletions in Mammalian Cell Lines
TypeCollection...of PCR products. Finney M, Nisson PE, Rashtchian A. Current Protocols in Molecular Biology. 2001...