We narrowed to 535 results for: genome
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TypeBlog Post...Protein-DNA Interactions CRISPRainbow and Genome Visualization CRISPR Between the Genes: How to Experiment...methods and tools for studying chromatin and the epigenome. If you have been considering some new techniques...Regulation CRISPR 101: Epigenetics and Editing the Epigenome CUT&RUN: An Improved Method for Studying Protein-DNA...Experiment with Enhancers and Epigenomics I would like to thank the many scientists with me at the Keystone ...
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A Practical Approach to Choosing the B(right)est Fluorescent Protein
TypeBlog Post...cells this would be possible with CRISPR/Cas-based genome editing. Selecting a bright fluorescent protein... -
Top Requested Lentivirus and AAV of 2016
TypeBlog Post...Sanjana NE, Shalem O, Zhang F. Improved vectors and genome-wide libraries for CRISPR screening. Nat Methods... -
Clear and Accessible Writing
TypeBlog Post...are captured at the 17%, 25%, and 60% layers, and genome-containing virions are captured at the 40% layer... -
GCE4All: Making Genetic Code Expansion Accessible
TypeBlog Post...pathway for the ncAA integrated into the cell’s genome, instead of incorporation via plasmid or media.... -
The time and cost required to make a plasmid
TypeBlog Post...thousands of plasmids, using both mass production genome wide screens and the more traditional “one at a... -
New Tool for Lineage Tracing: The ClonTracer Library
TypeBlog Post...barcodes that are integrated into target cells' genomes upon infection. When using the ClonTracer system... -
Working with Nuclear Receptors
TypeBlog Post...receptors and signaling cascades conceivably allows the genome to sense the impact of the total environment on... -
Browse
TypeCollection...Collections Structural Genomics Consortium Plasmids Browse All SGC Plasmids Structural Genomics Consortium Plasmids...Browse plasmids from the Structural Genomics Consortium (SGC) for 3D protein structure studies Plasmid... -
Empty Backbones - Choosing Your Perfect Plasmid Backbone
TypeCollection...Backbones CRISPR Genome modification lentiCRISPR v2 - 3rd gen lentiviral vector for mammalian genome editing Tet-pLKO-puro...Fusion Protein Function: Viral Vector Delivery, Genome Modification, mRNA Regulation, and More Selectable...can also be used for for viral vector delivery, genome modification, reporter assays, shRNA expression... efficiency, but do NOT integrate into the host genome Addgene has an extensive collection of plasmids...nondividing cells, integrate into host genome pLenti CMV GFP DEST - Lentiviral Gateway destination...Retroviral Easy and safe to use, integrate into host genome MSCV-IRES-GFP or pMSCV-IRES-mCherry FP - Mammalian...efficiency, but do NOT integrate into host genome pAdTrack-CMV - Shuttle vector for... -
Microbiology Resources
TypeCollection...bacterial genome editing is not always straightforward. Read our CRISPR Methods for Bacterial Genome Engineering...using CRISPR in your lab, specific CRISPR tools for genome editing in bacteria, and more. Synthetic Biology...range of organisms. Find CRISPR tools for use in genome editing of bacteria. CRISPathBrick Multiplex Plasmid...opens in a new window) JGI Integrated Microbial Genomes and Microbiomes (IMG/M) (Link opens in a new window...Program (Link opens in a new window) Saccharomyces Genome Database (SGD) (Link opens in a new window) Return... -
Structural Genomics Consortium Plasmids
TypeCollection...Plasmid Collections Structural Genomics Consortium Plasmids Structural Genomics Consortium Plasmids You may...Plasmids from the Structural Genomics Consortium (SCG), which are primarily used for determining protein...like... David Waugh Lab plasmids The Structural Genomics Consortium is a not-for-profit organization that... -
Viral Production
TypeCollection...sequencing of the Viral Genome Next-generation sequencing is performed on viral genomes isolated from the final...confirm the identity and integrity of the viral genome and the absence of unexpected DNA contaminants....pAAV-Ef1a-mCherry-IRES-Cre (55634-AAVrg) alone at 1.7E6 viral genomes (vg)/cell, pAAV-CAG-FLEX-rc [Jaws-KGC-GFP-ER2] ...Electron Microscopy The ratio of empty to full (i.e., genome containing) AAV particles within representative...of a lentiviral vector, incubated for 72 h, and genomic DNA is extracted. Primers and probes targeting ...harvesting cells several days later, and isolating genomic DNA. This DNA is then used as a template to amplify... -
CRISPR Plasmids - gRNAs
TypeCollection...exactly match your genomic target? Variation between a given gRNA sequence and your genomic target may reduce...Plasmids: gRNAs Browse CRISPR Plasmids By Function Genome Editing Cut Base Edit Nick Prime Edit Transcriptional...gRNA plasmids designed to target various genes or genomic regions. It is highly recommended that you determine... -
Cre-Lox and Other Site-Specific Recombinases
TypeCollection...recombinase systems, how to use them to modify the genome or control gene expression, and find plasmids for...derived from fungi and bacteriophages are powerful genome engineering tools used to precisely manipulate ... payload containing an attB target site into a genomic attP site. So far, their practical application ...site-specific recombinases can be used to modify the genome or control gene expression or skip ahead to browse... Vectors . Flp-IN: A single FRT site within the genome of a host cell line serves as the target location...stable integration of the gene of interest into the genome at the defined FRT site. Multiplexing: Orthogonal... may cause repetitive recombination leading to genomic instability and cell death. It is important to ... -
CRISPR Plasmids - Mammalian Expression
TypeCollection...loss of function alleles. To introduce specific genomic changes, researchers use ssDNA or dsDNA repair ... Publication Browse CRISPR Plasmids By Function Genome Editing Cut Base Edit Nick Prime Edit Transcriptional...the nickase to the target site by homology to a genomic DNA locus and encodes a primer binding site and...Cas9 (dCas9) can be used to purify a region of genomic DNA and its associated proteins, RNA, and DNA. ...fluorescent protein (FP) can help visualize specific genomic loci using fluorescent microscopy in living cells...sequence to direct the dCas9-FP fusion to a specific genomic sequence - potential target locations can include... -
Hot Plasmids and Viral Preps - March 2021
TypeBlog Post... can be used to integrate the tagged AID* into genomic sites of interests via CRISPR techniques. This ... -
GPCRs: How Do They Work and How Do We Study Them?
TypeBlog Post...G protein-coupled receptor genes from the human genome sequence. FEBS Letters 520:97–101 . https://doi.org... -
Getting Started with Behavioral Neuroscience: Standardizing Experiments and Using Viral Vectors
TypeBlog Post...have to be minimum around 1012-1013 vg/ml (vector genomes per milliliter) and lentiviral vectors around 108... -
BeHeard Award 2018: Diseases of Glycosylation, Arginine Mutagenesis, & Neural Development
TypeBlog Post...in years past, we've been working with the Rare Genomics Institute to provide plasmid grants to researchers...