Skip to main content
Addgene

Enter a sequence to perform a BLAST-based search of the Addgene plasmid sequence database.

Information

In Category

We narrowed to 1,025 results for: URE

Showing: 691 - 720 of 1025 results

  1. Mouse Modeling, Part 2: Breeding and Crossing Mice

    Type
    Blog Post
    ...inheritance: 1. Genotype your parental mice In order to ensure that your genetic modification will be passed along...genotype all of your F1 mice, as well as progeny from future generations. 4. Continue breeding your colony You...they are likely to stay on separate chromosomes in future generations as well, a concept known as linkage...expression of Cre, loxP, and your gene of interest. To ensure that the effects you see in your experiment are...

  2. Open Resources and Plasmid Tools For Studying C. elegans

    Type
    Blog Post
    ...et al. "cGAL, a temperature-robust GAL4–UAS system for Caenorhabditis elegans." Nature methods 14.2 (2017... detailed information about C. elegans 3’UTRs structures, alternative polyadenylation for all protein ... novel findings. These results are normally one figure and can be negative and/or even replicated studies...

  3. Split-BioID: An Improved Method for Studying Protein-Protein Interactions

    Type
    Blog Post
    ...those which you’ve already fluorescently labeled. Figure 1: Using Split-BioID to Identify Protein Protein...that give the strongest biotinylation signal, as measured via Western blot, and that result in proper localization...these two bait proteins stop interacting. This feature is particularly useful for in-depth characterization... of spatiotemporally defined protein complexes. Nature communications. PubMed PMID: 28585547. PubMed Central...

  4. Viral Vectors 101: Chemogenetics

    Type
    Blog Post
    ...the impacts of neural circuits on behavior. Figure 1: An overview of the chemogenetics system. ...characterize the compound, or compounds, you choose to ensure reliable results (Goutaudier et al., 2019). Using...Yang X, Stone O, Roth BL, Jin J (2015) The First Structure–Activity Relationship Studies for Designer Receptors...designed Gi-coupled receptor in transgenic mice. Nature Biotechnology 17:165–169 . https://doi.org/10.1038...

  5. Adeno Associated Virus (AAV) for Cell and Gene Therapy

    Type
    Blog Post
    ...infections. She is particularly passionate about HIV cure research and science communication.     References...to the central and peripheral nervous systems." Nature Neuroscience 20.8 (2017): 1172-1179. PubMed PMID...affinity-purified receptor-targeted viral vectors." Nature communications 6 (2015): ncomms7246. PubMed PMID... the Addgene Blog Check out our Viral Vectors Featured Topic Page Learn about CRISPR-AAV vectors Learn...

  6. Hot Plasmids and Viral Preps - March 2021

    Type
    Blog Post
    ...efficiently and accurately in a “single pot.’   Figure 1: Single-Pot Assembly: a) Graphic depiction of... sensor modules targeting a specific chromatin feature (e.g. a methylated histone such as H3K27me3), a...neuron-astrocyte, and cancer-stromal cell pairs.   Figure 2: Schematic of the interaction between the sender...quantification of this depletion using imaging-based measurements (Ashley et al., 2021).   Schematic showing...

  7. The Materials Science of Optogenetics Experiments

    Type
    Blog Post
    ...animal’s skull using dental cement (a similar procedure as implanting a guide cannula). A fiber optic ...optogenetics but may become the standard in the future. Now that your animals are all wired up and expressing...long-term optogenetic manipulation of neural circuits. Nature protocols. 2012;7(1):12-23. doi: 10.1038/nprot.2011.413...Neuroscience research. 2011;70(1):124-7. doi: 10.1016/j.neures.2011.01.007. PubMed PMID: 21238511. 6. Jeong, ...

  8. CrispyCrunch: High-throughput Design and Analysis of CRISPR+HDR Experiments

    Type
    Blog Post
    ... explain the thinking behind the tool, its key features, how it works, and how to use it. Background on...frequency determination (CFD score) is used to measure specificity of a guide to the target. The CFD score...Optimal mutation in-depth One the most sophisticated features of CrispyCrunch is how it mutates guide sequences...more detailed information on using CrispyCrunch, be sure to check out the How To Guide. Conclusion CrispyCrunch...

  9. Quick Guide to Working with Drosophila Part 1: Getting Started with Flies

    Type
    Blog Post
    ... 25°C. At low temperatures like 18°C, flies take longer to develop. At high temperatures like 30°C, flies...drift away with each passing generation.  Another feature of balancer chromosomes is that they produce dominant... during meiosis. This can sometimes be a handy feature when setting up genetic crosses. More importantly...

  10. Fluorescent Tagging of Endogenous Genes with SapTrap

    Type
    Blog Post
    ...been used to track protein localization, cell structure, intracellular trafficking, and protein turnover...plasmids to fluorescently tag markers of cellular structures in mammalian cells. These plasmids use fluorescent...reversibly degraded after the addition of auxin to the culture medium. Any number of regulatory sequences, including...“A Comprehensive Toolbox for Genome Editing in Cultured Drosophila melanogaster Cells.” G3 (Bethesda) ...

  11. Academic vs. Industry Postdocs

    Type
    Blog Post
    ...graduate school who were at AstraZeneca and could assure me that they were having a positive experience,... years. This time limit can feel like a lot of pressure. However, it means that your manager (and you)... choose. If publishing is important to you, make sure that your project will not involve proprietary compounds...reviewed by an internal committee before submission to ensure that it does not divulge any propriety information...

  12. What's Your Organism? Expanding Genomic Tools via the NSF EDGE Program

    Type
    Blog Post
    ... new experimental species. Discovering ways to culture, propagate, transform, store, and share all of ... "for development of tools, approaches, and infrastructure necessary for direct tests of cause and effect...was excited to be invited to attend. My job is to ensure that, in general, these labs all include materials...from Old Faithful in 60 °C soils. Dendrobatidae (Lauren O’Connell)  Poison frogs are great for studying...

  13. New CRISPR Tools: Cas7-11 and PASTE

    Type
    Blog Post
    ...sent to the AbuGoot lab for testing, they weren’t sure what they would find… but it was safe to say the...dual activities: processing pre-CRISPR RNA into mature CRISPR RNA and cleaving RNA at positions defined.... But they weren’t done engineering quite yet – surely, they thought, the integration rate could be improved...with the single-protein CRISPR effector Cas7-11. Nature. 2021 Sep;597(7878):720-725. doi: 10.1038/s41586...

  14. Transferable Skills Guide: External Collaborations

    Type
    Blog Post
    ...the same time, this project gives Snapgene great exposure to the community of biological scientists who ...institutions personally on conference calls and make sure to maintain these relationships by keeping in touch...an internal to an external connection is to make sure you keep open lines of communication with colleagues...interesting events, articles and newsletters I make sure to share them with a short note - this creates a...

  15. Career Insights: Technical Support Specialist

    Type
    Blog Post
    ...stages (i.e. postdoc level) and can include the pressure to publish in high-impact journals, and the requirement...with a custom-made reagent to manipulate cells (manufactured by one of the larger biotech companies), and...company, less exposed to the fast dynamics and pressure which are often found in sales or lab-based roles...name a few). Depending on the particular company structure you may be able to move into one of these departments...

  16. Five Popular Model Organisms

    Type
    Blog Post
    ... than studies in other model organisms or cell culture. For example, Scott Lowe’s lab utilized mice to...double-stranded RNA in Caenorhabditis elegans." nature391.6669 (1998): 806. PubMed PMID: 9486653. Hesselson... and its relationship to the human genome." Nature496.7446 (2013): 498. PubMed PMID: 23594743. PubMed ...organism for studying somatic mutations and cancer." Nature Education 1.1 (2008): 183. Zuber, Johannes, et ...

  17. March for Science

    Type
    Blog Post
    ...Makes Better Science Nature: What Trump’s new travel ban means for science Nature: Meet the scientists...job of having evidence”, scientists want to make sure having evidence is the job of everyone in government...all you need to do is select your state. State Legislatures: To find the website to contact representatives...

  18. Plasmids 101: Common Lab E. coli Strains

    Type
    Blog Post
    ...painstakingly cloned into the perfect empty backbone, made sure to add the right tags to your gene, and may have...provide enough background for you to distinguish the features of any common lab strain and determine whether... DNA, and more. Many mutations that make these features possible are present in most commercial strains...of protein expression in E. coli and the common features found in those bacteria. Check our our blog post...

  19. CRISPR 101: Off-Target Effects

    Type
    Blog Post
    ...experimental results and 2) perform targeted off-target measurements at those sites to get an idea of how high the...effects, you still need to do your due diligence to ensure they are indeed a non-issue. Above we mentioned...these outcomes. Rigorous analysis is essential to ensure off-target events are below a given threshold for...your risk level is, how to lower it, and how to ensure off-targets don’t mess with your results when they...

  20. Plasmids 101: Repressible Promoters

    Type
    Blog Post
    ... either category, but those are a subject for a future post! How are repressible promoters regulated...commonly used in yeast. In the first 24 hours of culture, when glucose is abundant and ethanol concentrations...during the late ethanol consumption phase of yeast culture. Repressible Binary Systems GAL4/UAS In Drosophila...the system, researchers have used split GAL4 architecture or combined the system with Flp/FRT, as reviewed...

  21. Participate in the Pets of Addgene Scavenger Hunt

    Type
    Blog Post
    ...contest is over, we will host other contests in the future. Subscribe to the blog to stay in the know!   ... hunt works works: You will be trying to find pictures of Addgene pets with Addgene-branded clothing ...pet gives you a clue to help you find the next picture. If you find the next correct photo, you will see...

  22. The Twelve Days of CRISPR

    Type
    Blog Post
    ...Addgene gave to me: a method to capture promoter-enhancer 3D chromatin structures using CRISPR. On the eleventh... you’ve been enjoying our CRISPR blog series. Be sure to subscribe to the CRISPR blog posts so you don...

  23. New Videos: Addgene Lab Tips

    Type
    Blog Post
    ...flick the tube several times. This will help ensure ensure equal distribution. Lab tip #3: Barcode everything... the latest episode.  Have some suggestions for future tips?  Send your ideas to [email protected].  Additional...

  24. Bringing Renewable Energy to Addgene

    Type
    Blog Post
    ... or hydroelectric in nature. The operation of -80C and -20C freezer temperatures, biosafety cabinet ventilation... lighting/HVAC requires a significant energy expenditure here at Addgene. These are critical systems that...

  25. PEI Calculator for Planning AAV Packaging Transfections

    Type
    Blog Post
    ...key step to any experiment and can help prevent future headaches. To help you plan PEI transfections for...simple to make adjustments for the type of tissue culture dish and number of dishes used. Here’s to making... pHelper: 2 RepCap Select what type of tissue culture dish you will be performing the transfection in...

  26. Tips for Working in Industry & Success in Management: Interview with Crystal Shih

    Type
    Blog Post
    ...What's a lab group in industry? The collaborative nature of working in industry and how delegating can empower...success. The importance of thinking about the big picture and not just the next experiment. Chapter 6: Advice... the treatment of various diseases, from heart failure to Alzheimer’s.  You can follow her on Twitter ...

  27. Alex Chavez on MD PhDs, CRISPR, Gene Drives, & More

    Type
    Blog Post
    ...29:54 - 31:25 : Nature's defenses against gene drives. 31:26 - 33:08 : Plans for future work at the Wyss...advisory board where he will help shape Addgene's future. Listen to this episode for insights into the process...

  28. Countdown to Halloween @Addgene

    Type
    Blog Post
    ...for years – searching our photo archives I found pictures back through 2009, though I suspect that our costume...months in advance. Our teams comb the news (pop culture events of the past year obviously make for good...takes home the ultimate prize – a glorious trophy. Sure it’s plastic and you have to share 1 trophy among...

  29. Podcast: Interview with Addgene's Founders

    Type
    Blog Post
    ...what the founders hope to see in the repository’s future. If you’ve ever been curious about what it takes...success Chapter 6 - Developing Addgene’s Brand and culture Chapter 7 - Building Addgene as a global organization...Tufts Launchpad, and more Chapter 10 - Addgene's Future, the research team, and the importance of sharing...

  30. Performing In Vivo CRISPR Screens Using the FITS Approach

    Type
    Blog Post
    ...perform in vivo screens in other cell types. A key feature of this system is a lentiviral gRNA expression ...the statistical power of in vivo screens. Figure 1: Using FITS to perform in vivo CRISPR screens...clonal dynamics in lymph nodes (LN) and tumor cells. Figure used with permission from Milling and Markson et...
Showing: 691 - 720 of 1025 results