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We narrowed to 120 results for: plasmid cloning by pcr

Showing: 81 - 100 of 120 results
  1. What is Polymerase Chain Reaction (PCR)

    Type
    Protocol
    ... Reaction (PCR) Polymerase Chain Reaction (PCR) You may also like... Plasmid Cloning by PCR Restriction...out our protocol on plasmid cloning by PCR to learn how to design primers for cloning purposes. What do ...Digest of Plasmid DNA DNA Ligation Background Information A standard Polymerase Chain Reaction (PCR) is an... how to perform Polymerase Chain Reaction (PCR). Basic PCR Program Initial Denaturation for 2 minutes ...strands. Materials List Reagents for each 50µL PCR: Thin-walled PCR tube Ice Bucket 2 μL Template DNA (10 ng...Polymerase (5 units/μL) PCR Machine Agarose Gel Procedure Primer Design and PCR Design Primers. See our...volume of master mix to add to each PCR tube. Secure the tops to the PCR tubes, gently tap each tube to bring...
  2. Minigenomes - a Safe Way to Study Dangerous Viruses Like the Ebola Virus

    Type
    Blog Post
    ...encoded on separate plasmids and are co-transfected into cells alongside a plasmid encoding the minigenome...four viral genes in the same plasmid (as opposed to four separate plasmids), there are a few reasons arguing...each would be relatively large. Cloning the viral genes in this plasmid would be more difficult compared...separate (and thus smaller) plasmids. Finally, having four separate plasmids allows researchers to partially... 2 μg minigenome plasmid per well (in a 6 well plate format). However, since plasmid quality and transfection...Minigenome System). From a more technical standpoint, a plasmid with all four genes and necessary control elements...detected directly by Northern blot analysis or RT-PCR. Uses of the minigenome system Minigenome systems...
  3. TALEN Plasmids and Kits

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    Collection
    ...List of plasmid kits and accessory plasmids available from Addgene for generating your own specific TALE...336 pFusX clones allowing for Golden Gate assembly of 15-16 RVD TALEN inserts in one cloning step rather...cells. Keith Joung Zhang Lab TALE Toolbox PCR/Golden Gate cloning method. Optimized for human expression....Yamamoto Additional Plasmids for Use with Addgene TALEN Kits For Use With: ID Plasmid Depositing PI Description... 2, 3, or 4. For both plasmids sequence positions 1214–2210 of pTAL3 were cloned into a pCS2 expression...putative enhancers in mammalian cells. These plasmids allow for cloning DNA fragments encoding TAL effector repeat...TALE Toolbox 49622 - 49647 24 plasmids Thoru Pederson TALEColor plasmids: destination vectors for use ...
  4. Twenty Years of Sharing: Expanding Accessibility

    Type
    Blog Post
    ... that made it easy to share plasmids, both for people depositing plasmids and for people requesting them... Collections Lentiviral Plasmids Tetracyline Inducible Plasmids Empty Backbones Bacterial Expression...Expression Systems AAV Plasmids Blogs Origin of Replication What is a Plasmid? How to Design Your... Verify Your Plasmid Using a Restriction Digest Analysis Videos What is a Plasmid? How to Design...video, however, is “What is a Plasmid?”, An animated explainer of a plasmid and its parts that helps the...them. Prior to this, many plasmids were available, but they often weren’t easily accessible, due to a ...barriers, allowing people to access a wide catalog of plasmids from all over the world. This idea, that available...
  5. Open Enzyme Collection

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    Collection
    ...Synthetic Biology Plasmids MoClo Guide Drew Endy Lab Plasmids Jennifer Molloy Lab Plasmids Blog: Golden Gate...collection include polymerase chain reaction (PCR), cloning, isothermal amplification, reverse transcription...Golden Gate assembly. Plasmids Explore the collection and order individual plasmids via the links below:...Browse the Open Enzyme collection of plasmids at Addgene for generating enzymes for molecular biology...the basis of manufacturing their own enzymes by cloning them into an expression vector of their choice ... (Link opens in a new window) . How to Use The plasmids in the Open Enzyme collection contain genetic ...not functional by themselves. Researchers should clone these enzymes into an expression vector of their...
  6. CRISPR References and Information

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    Collection
    ...gRNA design and cloning gRNA cloning vector PDF, 118 KB Church gRNA design and cloning for Cas9 orthologs...Addgene CRISPR Resources CRISPR Plasmids Addgene's collection of CRISPR plasmids. CRISPR Guide Addgene's guide...orthologs Cas9 plasmids PDF, 107 KB Chen and Wente Zebrafish: gRNA cloning, in vitro transcription, injection... Cas9 PDF, 66.8 KB Fujii gRNA design and cloning gRNA cloning vector Retroviral vectors: neomycin (pSIR-neo... Fly: gRNA cloning pAc-sgRNA-Cas9 PDF, 169 KB Marraffini Bacteria: pCas9 new spacer cloning pCas9 PDF,...Lander gRNA cloning into pLX-sgRNA pLX-sgRNA PDF, 129 KB Sontheimer gRNA design and cloning All-in-one ...All-in-one plasmid containing expression cassette for NmCas9 and BsmBI site for cloning in gRNA: pSimpleII-U6-tracr-U6...
  7. Harnessing TnpB for Genome Editing: A Compact and Versatile Tool for Your Research

    Type
    Blog Post
    ... Genome Engineering Guide Plant Plasmids and Resources CRISPR Plasmids and Resources ...for ωRNA (reRNA) expression (see Figure 1). Both plasmids contain a hygromycin resistance gene as the plant-selectable... gene for bacterial selection. The process for cloning the 20-nt guide RNA is identical for both vectors...(specific to your target) to screen colonies via PCR. A 354-bp product confirms successful insertion.... 2–3 positive colonies, grow them, and extract plasmids. Confirm the correct guide insertion by Sanger...primer. Step 7: Transformation Your confirmed plasmid is now ready for Agrobacterium-mediated, biolistic...
  8. Protocol - How to Design Primers

    Type
    Protocol
    ...Chain Reaction Plasmid Cloning by PCR Agarose Gel Electrophoresis Primer Design for PCR Oligonucleotide...Tips on designing primers for PCR Protocols...Oligonucleotide primers are necessary when running a PCR reaction. One needs to design primers that are complementary...protocol video below to learn how to design primers for PCR. Reference Page Top Index...
  9. Protocol - How to Perform a Diagnostic Digest

    Type
    Protocol
    ...performing either PCR - or restriction enzyme -based cloning to test individual clones before use of more...for verifying plasmids like this is "plasmid fingerprinting", where you cut the plasmid into 3-8 pieces...used to verify your plasmid. The goal of a diagnostic digest is to cut your plasmid into specific sized...insert and the 5000bp backbone. Verifying Plasmid Identity by "Plasmid Fingerprinting" Often, it will be enough... many plasmids out there that, when digested with restriction enzymes common to multiple cloning sites...have the correct plasmid. Verifying Insert Orientation by Restriction Digest If you clone an insert into...for how to perform a diagnostic digest to verify plasmid size, verify insert orientation, and more. Protocols...
  10. Empty Backbones - Choosing Your Perfect Plasmid Backbone

    Type
    Collection
    ... Plasmid Collections Empty Backbones Choosing Your Perfect Plasmid Backbone Empty backbones...expression - Gradia Lab plasmids for mammalian expression, Ligation Independent Cloning (LIC) pAG CMV Empty...Empty Puro - Empty mammalian expression plasmid for cloning untagged proteins pcDNA3.1-mCherry - Expresses...expression - Gradia Lab plasmids for bacterial expression, Ligation Independent Cloning (LIC) Also see our ...Collection NLS Nuclear localization dCas9 plasmid - dCas9 expression plasmid without effector fusions; 3X Flag... of plasmids for packaging and expression, see our dedicated Adeno-associated Virus (AAV) Plasmids page...collection of plasmids for packaging and expression, see our dedicated Lentiviral Plasmids page Retroviral...
  11. Plasmid Modification by Annealed Oligo Cloning (with Protocols)

    Type
    Protocol
    ...Modification by Annealed Oligo Cloning Plasmid Modification by Annealed Oligo Cloning You may also like... Restriction...Modify your plasmid MCS or add short sequences using oligo overlap cloning. Protocols... Digest of Plasmid DNA DNA Ligation Bacterial Transformation Summary Oligo overlap cloning can be used...a short stretch of DNA to a plasmid, such as: Changing a Multiple Cloning Site (MCS) Adding short tags... Protocols Plasmid Modification...tags - ex: HA or Flag Cloning shRNAs Background For the purposes of this tutorial we will discuss how to...NdeI, PacI, AscI, and MfeI. With oligo overlap cloning, you can design a set of oligos containing your...
  12. Easi-CRISPR: Generating Knock-In and Conditional Mouse Models

    Type
    Blog Post
    ...editing. How to use Addgene plasmids for Easi-CRISPR You can use Addgene plasmids to create a repair template...of Addgene plasmid options for templates - see the example at right using blue flame plasmid pmScarlet_...Easi-CRISPR repair templates using Addgene plasmids. Design PCR primers to add T7 promoter-left homology...desired insert (e.g., mScarlet).   Plasmid ID Plasmid Name Tags 69090 pMJ915 MBP (N ...out our CRISPR Guide Find Plasmids for Cas9 Purification Find CRISPR Plasmids for Mammalian Expression ...pre-CRISPR was very arduous. First, you’d construct a plasmid with your desired changes, long homology arms and...mouse embryonic stem cells. After selecting for clones with the recombined product, you’d microinject ...
  13. Protocol - pLKO.1 – TRC Cloning Vector

    Type
    Protocol
    ...μg pLKO.1 shRNA plasmid 750 ng psPAX2 packaging plasmid 250 ng pMD2.G envelope plasmid to 20 μl serum-...to vary the ratio of shRNA plasmid, packaging plasmid, and envelope plasmid to obtain the ratio that gives...Protocols pLKO.1 Protocol pLKO.1 - TRC Cloning Vector Addgene Plasmid 10878. Protocol Version 1.0. December... pLKO.1-TRC Cloning Vector A.1 The RNAi Consortium A.2 Map of pLKO.1 A.3 Related plasmids B. Designing...pLKO.1 TRC-Cloning Vector I.2 Recipes I.3 Warranty information Back to Top A. pLKO.1-TRC Cloning Vector A...in conjunction with the pLKO.1 TRC-cloning vector. Addgene Plasmid Description pLKO.1 – TRC control Negative...shRNA. psPAX2 Packaging plasmid for producing viral particles. pMD2.G Envelope plasmid for producing viral...
  14. Molecular Biology Protocol - Restriction Digest of Plasmid DNA

    Type
    Protocol
    ...commonly used in molecular cloning techniques, such as PCR or restriction cloning . It is also used to quickly... Protocols Restriction Digest of Plasmid DNA Restriction Digest of Plasmid DNA You ...digest of plasmid DNA Protocols...You may also like... Recovering Plasmid DNA from Bacterial Culture Purifying DNA from an Agarose Gel DNA...quickly check the identity of a plasmid by diagnostic digest . Last Upload: Oct. 11th, 2016 Protocol Video...chamber Pipetman Reagents Liquid DNA aliquot of your plasmid of interest (see below for recommend amounts) Appropriate...Procedure Select restriction enzymes to digest your plasmid. Pro-Tip To determine which restriction enzymes...
  15. Plasmid Cloning by Restriction Enzyme Digest (with Protocols)

    Type
    Protocol
    ...recipient plasmid (usually in the Multiple Cloning Site (MCS)), but do not cut elsewhere on the plasmid Will...recipient plasmid : You can modify the MCS of your recipient plasmid using Annealed-oligo Cloning . If you... Protocols Subcloning Plasmid Cloning by Restriction Enzyme Digest (aka Subcloning) You may also like...Information about plasmid cloning by restriction enzyme digest (subcloning), including design and experimental... sites to flank your insert : You can use PCR Based Cloning and add restriction sites to the ends of your...material. We recommend 1.5-2μg of donor plasmid and 1μg of recipient plasmid. It is also critical that as much...re-circularization of the recipient plasmid. You should treat your digested recipient plasmid with a phosphatase prior...
  16. Antibody Validation for Flow Cytometry

    Type
    Blog Post
    ...protein When expression plasmids are available, or the necessary expertise to clone them, it can be useful... includes clone names, which can allow you to search different providers for the same clone. This can ...assessment of labeling pattern between multiple antibody clones targeting the same protein (independent antibodies...involves the transient transfection of expression plasmids in a given cell line. For flow cytometry, it is...protein of interest. HLDA workshop approved antibody clones The antibody validation process represents a high...For CD365, they examined two different antibody clones produced by different vendors. The specific epitope...where different manufacturers may have the same clone available with different conjugates. Summary Flow...
  17. Protocol - How to Ligate Plasmid DNA

    Type
    Protocol
    ... Protocols DNA Ligation DNA Ligation You may also like... Plasmid Cloning by Restriction...to Ligate Plasmid DNA Protocols...Restriction Enzyme Digest Restriction Digest of Plasmid DNA Bacterial Transformation Background Information...final step in the construction of a recombinant plasmid is connecting the insert DNA (gene or fragment ...physically attached to the backbone and the complete plasmid can be transformed into bacterial cells for propagation...their concentration. However, for most standard cloning (where the insert is smaller than the vector) a...and insert DNA to use. Combine the following in a PCR or Eppendorf tube: Vector DNA Insert DNA Ligase Buffer...
  18. A Look Back at One Year of Plasmid Sharing for COVID-19 Research

    Type
    Blog Post
    ...received over 13,000 plasmids requests for COVID-19 related plasmids. These plasmids have reached labs in...small collection of plasmids for coronavirus research, including a handful of plasmids that have been in...some highlights of the plasmids shared over the last year and how these plasmids have been used to accelerate...circulating and plasmids containing these mutations have been deposited at Addgene. Plasmids deposited from... labs also deposited plasmids for producing COVID-19 diagnostic enzymes. Plasmids in this toolkit include... deposited plasmids expressed 26 of the 29 SARS-CoV-2 proteins which all but one are cloned into pLVX ...marker for stable cell clone selection. For more information on these plasmids and a behind-the-scenes...
  19. Video Library

    Type
    Protocol
    ...technique for molecular cloning, such as PCR- or restriction enzyme-based cloning. Purifying DNA from an...Storing and Handling Addgene Plasmids What to do after you receive your plasmids from Addgene Instructions...Protocol Diagnostic Restriction Digest Verify a plasmid using restriction enzymes Diagnostic Restriction...Instructions for Storing and Handling Plasmids Genomic Deletions with CRISPR Generate genomic deletions in mammalian...Transformations We walk you through a standard plasmid transformation protocol and offer some tips and...Center How to Deposit Your guide to depositing plasmids with Addgene Depositing Page Career Videos Get...maintaining sterility while working. AAV Titration by qPCR Use qPCR to measure the physical titer of your adeno-...
  20. Protocol - How to Purify DNA from an Agarose Gel

    Type
    Protocol
    ...technique for molecular cloning, such as PCR - or restriction enzyme -based cloning. Protocol: Gel Purification...Gel You may also like... Restriction Digest of Plasmid DNA Agarose Gel Electrophoresis DNA Ligation Background...
Showing: 81 - 100 of 120 results