We narrowed to 23 results for: CDA
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  TypeBlog Post...cell death. ccdA, another gene found in the ccd operon, codes for the antitoxin protein (CcdA) that protects...the cell against the toxic CcdB. Cells that lose ccdA through the loss of the F plasmid, succumb to the...gene and were therefore unable to propagate because CcdA wasn’t available to counteract the toxin. If, however...strains) will also be resistant to CcdB, as the native ccdA will be present. Most common cloning strains of ...
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Genome-wide Screening Using CRISPR
TypeBlog Post... for Using Pooled Lentiviral CRISPR Libraries” (McDade et al., 2016). To learn a bit about how CRISPR/...CRISPR Plasmids and Resources Page. References McDade JR, Waxmonsky NC, Swanson LE, Fan M (2016) Practical... Joel McDade... - 
  
Bacterial Toxin-antitoxin Systems as Molecular Biology Tools
TypeBlog Post...toxin-antitoxin system consists of CcdB (toxin) and CcdA (antitoxin) where CcdB inferes with DNA replication...results in DNA breakage and cell death. Conversely, CcdA binds to and blocks the activity of CcdB. Applications...and their applications MazE/MazF Aside from CcdB/CcdA, there are many protein-based toxin-antitoxin systems... - 
  
CRISPR 101: Cytosine and Adenine Base Editors
TypeBlog Post...with other deaminases: AID, CDA1, and APOBEC3G (Komor et al., 2017). CDA1-BE3 and AID-BE3 edited Cs following...activity Komor et al., 2017 BE4 and BE4-Gam; AID, CDA1 and APOBEC3G BE3 variants A second copy of UGI... - 
  
Searchable and Sortable gRNAs for Your Next CRISPR Experiment
TypeBlog Post...reagents, including many gRNA-containing plasmids (McDade et al, 2016). Many of the gRNAs contained within... Brook Pyhtila and Nicole Waxmonsky. References McDade J, Waxmonsky NC. Emerging CRISPR Technologies Available... - 
  
Twenty Years of Sharing: Addgene's Viral Vector Service
TypeBlog Post...manuscripts (Ersing et al., 2023; Haery et al., 2019; McDade et al., 2016), video, educational resources, and...www.frontiersin.org/articles/10.3389/fnana.2019.00093 McDade, J. R., Waxmonsky, N. C., Swanson, L. E., & Fan... - 
  
CRISPR Methods for Bacteria: Genome Engineering, CRISPRa, CRISPRi, Base Editing, and More
TypeBlog Post...Cytidine deaminase PmCDA1 Akihiko Kondo’s lab identified a cytidine deaminase, PmCDA1, that could be fused... - 
  
Video Library
TypeProtocol...to expand their international reach. Joel McDade Joel McDade, Addgene's Business Development Manager, ... - 
  
MassBioEd Career Exploration Day at Addgene
TypeBlog Post...pizza and trivia rounds, Senior Scientist Joel McDade’s presentation on the emerging CRISPR genome editing... - 
  
Components of CRISPR/Cas9
TypeBlog Post... Joel McDade... - 
  
Plasmids 101: The Wide World of Natural Plasmids
TypeBlog Post...a toxin, CcdB, and the resistance to that toxin, CcdA. Knowing which strains of E. coli contain this F... - 
  
CRISPR 101: Mammalian Expression Systems and Delivery Methods
TypeBlog Post... with validated tools. Special thanks to Joel McDade for creating the Expression Systems table. Marcy... - 
  
Viral Vectors 101: Preparing Pooled Libraries
TypeBlog Post...pooled libraries use these protocols. References McDade JR, Waxmonsky NC, Swanson LE, Fan M. Practical ... - 
  
The PAM Requirement and Expanding CRISPR Beyond SpCas9
TypeBlog Post... Joel McDade... - 
  
CRISPR 101: Which Cas9 Do I Choose for My CRISPR Experiment?
TypeBlog Post...This post was originally written by Joel McDade and significantly updated in 2022 by Susanna Stroik. ... - 
  
CRISPR-mediated Plant Base Editors
TypeBlog Post... CBE SpCas9 rAPOBEC1 NGG 6 SpCas9 Target-AID (PmCDA1) NGG 5 SpCas9-VQR rAPOBEC1 NGA 8 SaCas9-KKH... - 
  
CRISPR 101: Targeting RNA with Cas13a (C2c2)
TypeBlog Post... Joel McDade... - 
  
CRISPR 101: Engineering the Plant Genome Using CRISPR/Cas9
TypeBlog Post... Joel McDade... - 
  
Plasmids 101: Common Lab E. coli Strains
TypeBlog Post...synthesis in absence of protein synthesis Ptrc-ccdA Propagation of ccdB-containing plasmids Hte ... - 
  
Immunology Research Plasmids and Resources
TypeCollection...histocompatibility complex, class I, F CDA12, HLA-5.4, HLA-CDA12, HLAF HLA-G major histocompatibility complex...