We narrowed to 54 results for: tomato
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TypeBlog Post...lab recently "broke the PE efficiency barrier in tomatoes" by combining several approaches (Vu et al., 2024...chaperone, RT: reverse transcriptase. Right: T1 tomato plants that inherited an edited gene to confer ...the team was able to drive prime editing in both tomatoes and Arabidopsis, suggesting the improvements may... species. In addition, they generated offspring tomato plants that inherited the genomic edit but not ...prime editing enables heritable desired edits in tomato and Arabidopsis. Nature Plants, 10(10), 1502–1513...
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Early Career Researcher Toolbox: Free Tools for Science Writing
TypeBlog Post...15-30 minute break. The method is named for the tomato or “Pomodoro” kitchen timer that the technique’...student. The Pomodoro timer is literally a tomato! Image from Gerlos. Tools for checking grammar... -
CRISPR-mediated Plant Base Editors
TypeBlog Post...-1)- CBEs are successful base editors in rice, tomato, wheat, and potato. Target-AID and rAPOBEC based...Zenpei, et al. "Targeted base editing in rice and tomato using a CRISPR-Cas9 cytidine deaminase fusion."... -
The Michael Davidson Collection: One-Stop Shop for Fluorescent Proteins
TypeBlog Post...improved fruit colors (e.g., apple, papaya, and tomato) and the photoactivatable fluors (e.g. Phamret ... -
CRISPR 101: Engineering the Plant Genome Using CRISPR/Cas9
TypeBlog Post...and several crop species including potato, corn, tomato, wheat, mushroom, and rice (Khatodia et al., 2016... -
Plant Plasmids and Resources
TypeCollection...systems such as Arabidopsis, wheat, maize, rice, tomato, and a variety of other species. In addition to... genomes using genome engineering; validated in tomato, tobacco, M. truncatula , wheat, and barley - Daniel... -
New Viral Vectors - Winter 2025
TypeBlog Post...Roth New serotype pAAV-EF1α-F-FLEX-mNaChBac-T2A-tdTomato AAV8 Molecular tool Massimo Scanziani New viral...Optogenetics Jonathan Ting New viral prep pAAV_BiSSTe10_dTomato_nlsdTomato AAV-PHPeB Control Gordon Fishell New...Optogenetics Gordon Fishell New viral prep pAAV_BiCHATe27_dTomato_nlsdTomato AAV-PHPeB Control Gordon Fishell New...Optogenetics Gordon Fishell New viral prep pAAV_BiVIPe4_dTomato_nlsdTomato AAV-PHPeB Control Gordon Fishell New...Gordon Fishell New viral prep pAAV_BiLAMP5e3_dTomato_nlsdTomato_nlsdTomato AAV-PHPeB Control Gordon Fishell...Optogenetics Gordon Fishell New viral prep pAAV_BiPVe4_dTomato_nlsdTomato AAV-PHPeB Control Gordon Fishell New...Optogenetics Gordon Fishell New viral prep pAAV_BiPVe3_dTomato_nlsdTomato AAV-PHPeB Control Gordon Fishell New... -
Teaching an Old DOG New Tricks: Controlling Protein Activity with GFP
TypeBlog Post...used red fluorescent proteins dsRed, mCherry, and TdTomato do not induce transcription. Thus, T-DDOGs can...expression robustly activated the reporter gene TdTomato, whose expression was absent without electroporated...T-DDOGs with two mouse GFP reporter lines; again, TdTomato was seen only in cells with GFP, at a high activation...frequency of 56-93%. In the converse test, 98% of TdTomato expressing cells were GFP+, indicating a robust... -
Hot Plasmids: Spring 2025
TypeBlog Post...activator channelrhodopsin-2 or fluorescent reporter dTomato under the control of one of seven enhancers specific... PV interneurons in mice. A) AAV expression of dTomato reporter (magenta) under the control of the BiPVe3...indicated. B) Specificity, as percentage of BiPVe3-dTomato and PV-positive cells out of all BiPVe3-dTom cells...stack of a biocytin-filled cell expressing BiPVe3-dTomato, displaying characteristic PV basket cell morphology... -
New Viral Vectors - Summer 2024
TypeBlog Post...pAAV-Ef1a-fDIO-ChrimsonR-tdTomato AAV9 Controls Jensen New serotype pAAV-CAG-2xNLS-tdTomato-WPRE-hGHpolyA AAV9...multiple serotypes pAAV-CAG-FLEX-rc [Jaws-KGC-tdTomato-ER2] AAV5, AAV8 Optogenetics Boyden New serotypes... -
New and Upcoming Viral Vectors - Spring 2019
TypeBlog Post...pAAV-Syn-FLEX-rc [Archon1-KGC-GFP-ER2] pAAV-FLEX-tdTomato pAAV-GFAP104-mCherry pAAV-mDlx-NLS-mRuby2 CAG-...fluorescent-tagged molecular tool. Find pAAV-FLEX-tdTomato, pAAV-GFAP104-mCherry, pAAV-mDlx-NLS-mRuby2, CAG-NLS-GFP... pAAV-hSyn-DIO-mCherry 59462 AAV2 pAAV-CAG-tdTomato (codon diversified) 37825 AAV8*, AAV9* pAAV-CAG-GFP... -
Choosing the B(right)est Fluorescent Protein: Aggregation Tendency
TypeBlog Post...(Shaner et al, 2008). Obligate dimers (such as dTomato) that promote interactions between the FPs interfere...CytERM-mKOkappa, CytERM-mTurquoise2, and CytERM-dTomato. When using and interpreting the results of the...proteins. Fusions of CytERM with mTurquoise2 and dTomato, which are established monomeric and dimerizing... -
Genetically-encoded Sparse Cell Labeling - A SPARC of Innovation
TypeBlog Post...CsChrimson::tdTomato, an optogenetic tool (CsChrimson) attached to a fluorescent indicator (tdTomato), as the... -
New Viral Vectors - Fall 2024
TypeBlog Post...Esteban Engel New serotype pAAV-hSyn-Cre-P2A-dTomato AAV PHP.eB Recombinases Rylan Larsen New serotype...multiple serotypes pAAV-Syn-FLEX-rc[ChrimsonR-tdTomato] AAV1 Optogenetics Edward Boyden New serotype ... -
New and Upcoming Viral Vectors - May 2020
TypeBlog Post...AAVrg pAAV-hDlx-GiDREADD-dTomato-Fishell-5 83897 AAVrg pAAV-hDlx-GqDREADD-dTomato-Fishell-4 Controls... -
Announcing the Winners of the 2021 Michael Davidson and Roger Tsien Commemorative Conference Awards
TypeBlog Post...tag neurons activated by opioid withdrawal with tdTomato and assessed cFos expression. She will explore...periaqueductal gray (PAG), with red neurons expressing tdTomato and green neurons expressing cFos. Image from ... -
Hot Plasmids and Viral Preps - May 2021
TypeBlog Post...targeted tdTomato and pre-synaptic targeted synaptophysin tagged eGFP. AAV phSyn1(S)-FLEX-tdTomato-T2A-SypEGFP-WPRE... -
Which Fluorescent Protein Should I Use?
TypeBlog Post...indicators (e.g. GCaMP). Others include: pHluorin & pHTomato (pH sensors), HyPer (H2O2 sensor), ArcLight (voltage...fluorescent intensity upon pH changes (e.g. pHluorin, pHTomato). Keep this list handy as you plan your next ... -
Hot Plasmids - August 2020
TypeBlog Post...mDlx-GFP, hDlx-FLEX-GFP, hDlx-Flex-dTomato, mDlx-GCaMP6f, hDlx-GiDREADD-dTomato and mDlx-ChR2-mCherry. Find... -
Neuronal labeling with Spaghetti Monster
TypeBlog Post...famous ones are influenza hemagglutinin (HA), myelocytomatosis viral oncogene (myc), simian virus 5-derived...usually provided by red fluorescent proteins such as tdTomato or RFP or blue fluorescent proteins like Cyan....