Skip to main content

We narrowed to 14 results for: proc.2

Showing: 1 - 14 of 14 results
  1. Chemogenetics Guide

    Type
    Guide
    ...receptors potently activated by an inert ligand. Proc Natl Acad Sci USA, 104 (12), 5163–5168. https://...and biological light sources for opsin activation. Proc Natl Acad Sci USA, 113 (3), E358–E367. https://doi.org...with a specifically designed Gi-coupled receptor. Proc Natl Acad Sci USA, 95 (1), 352–357. https://doi....G protein regulation of β cell function in vivo. Proc Natl Acad Sci USA, 106 (45), 19197–19202. https:...muscarinic receptor and has not been used in vivo. Figure 2: DREADDs, their ligands, and signaling properties.... Reference Rq(R165L) Human M3 muscarinic Arrestin-2/-3 CNO* Increase Arrestin translocation Arrestin signalling...hM1Dq hM5Dq Human M3 muscarinic G αq CNO* Increase Ca 2+ Neuronal burst firing Armbruster et al., 2007 rM3D...
  2. Optogenetics Guide

    Type
    Guide
    ...influx into the cell when stimulated. Channelrhodopsin-2 (ChR2), the first widely adopted optogenetic tool,... (Phy) interaction 660 Cryptochromes Cryptochrome 2 and CIB1 Blue-light–mediated induction of protein ...interactions based on Arabidopsis thaliana cryptochrome 2 and CIB1 450 LARIAT Inhibits protein function by reversibly...customizable TALE DNA-binding domain with cryptochrome 2 protein and its interacting partner CIB1 to control...transcription effectors OPTOSTIM PHR domain2 of cryptochrome 2 (Cry2) from Arabidopsis thaliana is fused to truncated...control of biological systems. Nat Rev Methods Primers, 2 , 55. https://doi.org/10.1038/s43586-022-00136-4 PMID... with single-spike temporal resolution. PloS One, 2 (3), e299. https://doi.org/10.1371/journal.pone.0000299...
  3. Adenovirus Guide

    Type
    Guide
    ...use of pAdEasy-2 (Addgene #16401) can increase the capacity of the rAdV vector. pAdEasy-2 does not contain... incorporate additional genomic deletions. Figure 2: First-generation rAdV vectors. Created with BioRender.com...and have to be handled at biosafety level two (BSL-2). They are highly immunogenic and can trigger a strong...era of personalized medicine . Genes & Diseases, 4 (2), 43–63. https://doi.org/10.1016/j.gendis.2017.04.001...adenoviruses using the AdEasy system . Nature Protocols, 2 (5), 1236–1247. https://doi.org/10.1038/nprot.2007.135...Adenoviral vector vaccine platforms in the SARS-CoV-2 pandemic . NPJ Vaccines, 6 (1), 97. https://doi.org...Adenoviral backbone plasmid that lacks E1 and E3. pAdEasy-2 Adenoviral backbone plasmid that lacks E1, E3, and...
  4. Lentiviral Vector Guide

    Type
    Guide
    ...intact. First-generation plasmids include (Figure 2): Transfer plasmid — contains transgene and wild-type...envelope removed Envelope plasmid — contains env Figure 2: First-generation lentiviral plasmids. Created with...plasmid 1 — contains gag and pol Packaging plasmid 2 — contains rev Envelope plasmid — contains env Third-generation...The inside out of lentiviral vectors. Viruses , 3 (2), 132–159. https://doi.org/10.3390/v3020132 PMID: ...Infectivity and Integration Targeting. PLoS ONE , 2 (12), e1340. https://doi.org/10.1371/journal.pone.0001340...features of lentiviral vectors. Human Gene Therapy , 24 (2), 132–142. https://doi.org/10.1089/hum.2012.229 PMID...lentiviral vectors from your plasmids (Figure 5). This process requires a production cell line, typically human...
  5. Adeno-associated virus (AAV) Guide

    Type
    Guide
    ...components, see the AAV Plasmid Elements table . Figure 2: Plasmids required for rAAV vector production. Created... pseudotyped with viral capsids from serotypes 1, 2, and 5 display differential efficiency and cell tropism...the central nervous system . Molecular Therapy, 10 (2), 302–317. https://doi.org/10.1016/j.ymthe.2004.05.024...the production of AAV vectors . Microorganisms, 12 (2), 384. https://doi.org/10.3390/microorganisms12020384...retrograde access to projection neurons . Neuron, 92 (2), 372–382. https://doi.org/10.1016/j.neuron.2016.09.021...genome. Instead, the linear rAAV DNA is typically processed into a double-stranded circular episome which ...AAV serotypes. Pseudotypes Pseudotyping is the process of producing viral vectors in combination with ...
  6. CRISPR Guide

    Type
    Guide
    ...Browse Plasmids: Double-Strand Break (Cut) Figure 2: Overview of the NHEJ repair mechanism. Multiplex ...systems enable researchers to target anywhere from 2–7 genetic loci by cloning multiple gRNAs into a single...Cas9 is included in the gRNA-containing plasmid, or 2-vector systems, in which Cas9 must be delivered separately...your experimental cell population (Figure 8E). In a 2-vector system, you’ll need to either co-infect with...the presence of infectious organisms (like SARS-CoV-2 ) and genetic mutations. Similar to Cas9 and Cas12...Cas enzymes? CasPEDIA is an encyclopedia of Class 2 CRISPR systems with wiki entries describing enzyme...off-target effects by using a single Cas9 nickase and 2 different gRNAs, which bind in close proximity on ...
  7. Antibody Guide

    Type
    Guide
    ...cells; function is unknown Monomer with a valency of 2 IgE Protects against parasites and is responsible ...such as anaphylactic shock Monomer with a valency of 2 IgG The most abundant isotype in blood, also found...secondary immune response Monomer with a valency of 2 IgG1; IgG2; IgG3; IgG4 IgM Produced during the primary... ranging from antibody fragments (shown in Figure 2) to completely unrelated molecules. Examples include...used for assembling protein nanostructures. Figure 2: An antibody (IgG, far left) compared to alternative...randomized reorganization process, creating a unique binding site. This process, known as V(D)J recombination...delaying a process through sequential rounds of validation. Validation of an antibody is a process separate...
  8. Plan Your Experiment

    Type
    Guide
    ...components (Figure 2), and the optimal system will likely depend on your cell type. Figure 2: Different delivery...either (1) a lack of gRNA and/or Cas9 expression or (2) a lack of efficient target cleavage in cells that...CRISPR-Based genome editing. Trends in Biotechnology , 36 (2), 173–185. https://doi.org/10.1016/j.tibtech.2017.11.006...genetic manipulation to model a specific disease or process of interest. Do you want to: Generate complete ... method of delivery and the cell type. Before proceeding, we recommend asking labmates/colleagues, searching... genes modulate transcription and nascent RNA processing. Nature Structural & Molecular Biology , 30 (...
  9. Guide to Using Pooled Libraries

    Type
    Guide
    ...types: positive screens and negative screens (Figure 2). Both types of screen employ a selection method relevant...planning to conduct a pooled library screen. Figure 2: A simplified outline for using lentiviral gRNA libraries...for amplifying and using a pooled library. The process diverges for lentiviral of DNA-based screens. NGS...positive and negative screens follow the same basic process: Amplify the library (electroporation and maxiprep...
  10. Promoters

    Type
    Guide
    ...positions from the transcription start site (TSS) (Figure 2). The Pribnow box (TATAAT) is located at the -10 position...recognizes different core promoter sequences. Figure 2. Basic structure of a bacterial promoter. TSS = transcription...recognition and binding. On the other hand, the process in eukaryotes is much more complex. Eukaryotes ...
  11. Gamma-Retroviral Vector Guide

    Type
    Guide
    ...gamma-retroviral vectors, you need three plasmids (Figure 2): Transfer plasmid — contains transgene, sgRNA, or...for different cell types (known as tropism). Figure 2: Gamma-retroviral plasmids. Created with BioRender.com...can be altered by changing the envelope gene, a process called pseudotyping. VSV-G is by far the most common...to their integration into a host’s genome. The process of generating stable cell lines with gamma-retroviral...specificity of infection for CD4-expressing cells. Proceedings of the National Academy of Sciences , 94 (16)...the beginning of R, has a 5' cap structure, and proceeds through U5 and the rest of the provirus. Some ...plasmids, packaging cell line). Infection The natural process of entry and multiplication of a pathogen, like...
  12. Science Guides

    Type
    Guide
    ...specific control of activity. Read More CRISPR Class 2 C lustered R egularly I nterspaced S hort P alindromic...frequently neurons) and their governing biomolecular processes. The tools and technologies developed for optogenetics...
  13. Molecular Biology Reference

    Type
    Guide
    ...unique restriction enzyme recognition site (Figure 2). These elements allow for the propagation of the ...elements are summarized in the table below. Figure 2: General structure of a plasmid. Plasmid Element Description...cellular processes and gene regulation. Regions that code for proteins are transcribed and processed into ...be translated, the DNA is converted to RNA in a process called transcription. RNA uses the same nucleotide... similarly referred to as cloned DNA, and this process of generating multiple identical copies of a recombinant...next-generation sequencing (NGS) take advantage of the process of DNA replication in vitro. During replication...complementary strand. Mimicking the DNA replication process requires the four nucleotides (dNTPs), a DNA polymerase...
  14. Molecular Cloning Techniques

    Type
    Guide
    ...Read more in our Gateway Cloning blog post . Figure 2: Summary of Gateway cloning. Created with BioRender.com...the creation of recombinant DNA, is an essential process used in scientific research and discovery. With...recombination reaction, drastically simplifying the process and reducing the amount of time required for cloning...directly into E. coli , where the normal replication process will repair the nicks. It is important to note ...
Showing: 1 - 14 of 14 results