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pRGEB32 Citations (26)

Originally described in: Boosting CRISPR/Cas9 multiplex editing capability with the endogenous tRNA-processing system.
Xie K, Minkenberg B, Yang Y Proc Natl Acad Sci U S A. 2015 Mar 17;112(11):3570-5. doi: 10.1073/pnas.1420294112. Epub 2015 Mar 2.
PubMed Journal

Articles Citing pRGEB32

Discovery of rice essential genes by characterizing CRISPR-edited mutation of closely related rice MAP kinase genes. Minkenberg B, Xie K, Yang Y. Plant J. 2016 Oct 16. doi: 10.1111/tpj.13399. PubMed
Genome-wide analyses of late pollen-preferred genes conserved in various rice cultivars and functional identification of a gene involved in the key processes of late pollen development. Moon S, Oo MM, Kim B, Koh HJ, Oh SA, Yi G, An G, Park SK, Jung KH. Rice (N Y). 2018 Apr 23;11(1):28. doi: 10.1186/s12284-018-0219-0. PubMed
The rice blast resistance gene Ptr encodes an atypical protein required for broad-spectrum disease resistance. Zhao H, Wang X, Jia Y, Minkenberg B, Wheatley M, Fan J, Jia MH, Famoso A, Edwards JD, Wamishe Y, Valent B, Wang GL, Yang Y. Nat Commun. 2018 May 23;9(1):2039. doi: 10.1038/s41467-018-04369-4. PubMed
RSL Class II Transcription Factors Guide the Nuclear Localization of RHL1 to Regulate Root Hair Development. Moon S, Cho LH, Kim YJ, Gho YS, Jeong HY, Hong WJ, Lee C, Park H, Jwa NS, Dangol S, Chen Y, Park H, Cho HS, An G, Jung KH. Plant Physiol. 2019 Feb;179(2):558-568. doi: 10.1104/pp.18.01002. Epub 2018 Dec 13. PubMed
A Multiplexed CRISPR/Cas9 Editing System Based on the Endogenous tRNA Processing. Xie K, Yang Y. Methods Mol Biol. 2019;1917:63-73. doi: 10.1007/978-1-4939-8991-1_5. PubMed
Fusion of the Cas9 endonuclease and the VirD2 relaxase facilitates homology-directed repair for precise genome engineering in rice. Ali Z, Shami A, Sedeek K, Kamel R, Alhabsi A, Tehseen M, Hassan N, Butt H, Kababji A, Hamdan SM, Mahfouz MM. Commun Biol. 2020 Jan 23;3(1):44. doi: 10.1038/s42003-020-0768-9. PubMed

Associated Plasmids

CRISPR-mediated accelerated domestication of African rice landraces. Lacchini E, Kiegle E, Castellani M, Adam H, Jouannic S, Gregis V, Kater MM. PLoS One. 2020 Mar 3;15(3):e0229782. doi: 10.1371/journal.pone.0229782. eCollection 2020. PubMed
Precise CRISPR-Cas9 Mediated Genome Editing in Super Basmati Rice for Resistance Against Bacterial Blight by Targeting the Major Susceptibility Gene. Zafar K, Khan MZ, Amin I, Mukhtar Z, Yasmin S, Arif M, Ejaz K, Mansoor S. Front Plant Sci. 2020 Jun 12;11:575. doi: 10.3389/fpls.2020.00575. eCollection 2020. PubMed
CAFRI-Rice: CRISPR Applicable Functional Redundancy Inspector to Accelerate Functional Genomics in Rice. Hong WJ, Kim YJ, Kim EJ, Kumar ANC, Moon S, Gho YS, Yoou MH, Kim ST, Jung KH. Plant J. 2020 Jul 11. doi: 10.1111/tpj.14926. PubMed
GORI, encoding the WD40 domain protein, is required for pollen tube germination and elongation in rice. Kim YJ, Kim MH, Hong WJ, Moon S, Kim EJ, Silva J, Lee J, Lee S, Kim ST, Park SK, Jung KH. Plant J. 2021 Mar;105(6):1645-1664. doi: 10.1111/tpj.15139. Epub 2021 Jan 21. PubMed
CRISPR/Cas9 Targeted Mutagenesis for Functional Genetics in Maize. Hunter CT. Plants (Basel). 2021 Apr 8;10(4). pii: plants10040723. doi: 10.3390/plants10040723. PubMed

Associated Plasmids

Targeted mutation of transcription factor genes alters metaxylem vessel size and number in rice roots. Reeger JE, Wheatley M, Yang Y, Brown KM. Plant Direct. 2021 Jun 15;5(6):e00328. doi: 10.1002/pld3.328. eCollection 2021 Jun. PubMed
Loss of Function of OsFBX267 and OsGA20ox2 in Rice Promotes Early Maturing and Semi-Dwarfism in gamma-Irradiated IWP and Genome-Edited Pusa Basmati-1. Andrew-Peter-Leon MT, Selvaraj R, Kumar KK, Muthamilarasan M, Yasin JK, Pillai MA. Front Plant Sci. 2021 Sep 22;12:714066. doi: 10.3389/fpls.2021.714066. eCollection 2021. PubMed
Recurrent mutations promote widespread structural and functional divergence of MULE-derived genes in plants. Young Chae G, Hong WJ, Jeong Jang M, Jung KH, Kim S. Nucleic Acids Res. 2021 Nov 18;49(20):11765-11777. doi: 10.1093/nar/gkab932. PubMed
Novel Mutant Alleles Reveal a Role of the Extra-Large G Protein in Rice Grain Filling, Panicle Architecture, Plant Growth, and Disease Resistance. Biswal AK, Wu TY, Urano D, Pelissier R, Morel JB, Jones AM, Biswal AK. Front Plant Sci. 2022 Jan 3;12:782960. doi: 10.3389/fpls.2021.782960. eCollection 2021. PubMed
Tissue-specific enhancement of OsRNS1 with root-preferred expression is required for the increase of crop yield. Gho YS, Choi H, Moon S, Kim SR, Ha SH, Jung KH. J Adv Res. 2022 Dec;42:69-81. doi: 10.1016/j.jare.2022.05.007. Epub 2022 May 21. PubMed
A myosin XI adaptor, TAPE, is essential for pollen tube elongation in rice. Hong WJ, Kim EJ, Yoon J, Silva J, Moon S, Min CW, Cho LH, Kim ST, Park SK, Kim YJ, Jung KH. Plant Physiol. 2022 Aug 29;190(1):562-575. doi: 10.1093/plphys/kiac299. PubMed
OsSNDP3 Functions for the Polar Tip Growth in Rice Pollen Together with OsSNDP2, a Paralog of OsSNDP3. Moon S, Kim YJ, Park HE, Kim J, Gho YS, Hong WJ, Kim EJ, Lee SK, Suh BC, An G, Jung KH. Rice (N Y). 2022 Jul 20;15(1):39. doi: 10.1186/s12284-022-00586-0. PubMed
Identification of xylan arabinosyl 2-O-xylosyltransferases catalyzing the addition of 2-O-xylosyl residue onto arabinosyl side chains of xylan in grass species. Zhong R, Lee C, Cui D, Phillips DR, Adams ER, Jeong HY, Jung KH, Ye ZH. Plant J. 2022 Oct;112(1):193-206. doi: 10.1111/tpj.15939. Epub 2022 Sep 5. PubMed
Smc5/6's multifaceted DNA binding capacities stabilize branched DNA structures. Chang JT, Li S, Beckwitt EC, Than T, Haluska C, Chandanani J, O'Donnell ME, Zhao X, Liu S. Nat Commun. 2022 Nov 23;13(1):7179. doi: 10.1038/s41467-022-34928-9. PubMed
Functional genomic analysis of K(+) related salt-responsive transporters in tolerant and sensitive genotypes of rice. Haque US, Elias SM, Jahan I, Seraj ZI. Front Plant Sci. 2023 Jan 19;13:1089109. doi: 10.3389/fpls.2022.1089109. eCollection 2022. PubMed
Employing template-directed CRISPR-based editing of the OsALS gene to create herbicide tolerance in Basmati rice. Zafar K, Khan MZ, Amin I, Mukhtar Z, Zafar M, Mansoor S. AoB Plants. 2023 Jan 13;15(2):plac059. doi: 10.1093/aobpla/plac059. eCollection 2023 Feb. PubMed
Editing efficiencies with Cas9 orthologs, Cas12a endonucleases, and temperature in rice. Illa-Berenguer E, LaFayette PR, Parrott WA. Front Genome Ed. 2023 Mar 17;5:1074641. doi: 10.3389/fgeed.2023.1074641. eCollection 2023. PubMed
The RLCK subfamily VII-4 controls pattern-triggered immunity and basal resistance to bacterial and fungal pathogens in rice. Jalilian A, Bagheri A, Chalvon V, Meusnier I, Kroj T, Kakhki AM. Plant J. 2023 May 29. doi: 10.1111/tpj.16323. PubMed
An efficient transformation method for genome editing of elite bread wheat cultivars. Biswal AK, Hernandez LRB, Castillo AIR, Debernardi JM, Dhugga KS. Front Plant Sci. 2023 May 16;14:1135047. doi: 10.3389/fpls.2023.1135047. eCollection 2023. PubMed
Genomic basis of multiphase evolution driving divergent selection of zinc-finger homeodomain genes. Jang MJ, Hong WJ, Park YS, Jung KH, Kim S. Nucleic Acids Res. 2023 Aug 11;51(14):7424-7437. doi: 10.1093/nar/gkad489. PubMed

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