pAAVS1-NDi-CRISPRi (Gen1) Citations (16)

Originally described in: CRISPR Interference Efficiently Induces Specific and Reversible Gene Silencing in Human iPSCs.
Mandegar MA, Huebsch N, Frolov EB, Shin E, Truong A, Olvera MP, Chan AH, Miyaoka Y, Holmes K, Spencer CI, Judge LM, Gordon DE, Eskildsen TV, Villalta JE, Horlbeck MA, Gilbert LA, Krogan NJ, Sheikh SP, Weissman JS, Qi LS, So PL, Conklin BR Cell Stem Cell. 2016 Apr 7;18(4):541-53. doi: 10.1016/j.stem.2016.01.022. Epub 2016 Mar 10. PubMed Journal

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Articles Citing pAAVS1-NDi-CRISPRi (Gen1)

Articles
Single-Cell RNA-Sequencing-Based CRISPRi Screening Resolves Molecular Drivers of Early Human Endoderm Development. Genga RMJ, Kernfeld EM, Parsi KM, Parsons TJ, Ziller MJ, Maehr R. Cell Rep. 2019 Apr 16;27(3):708-718.e10. doi: 10.1016/j.celrep.2019.03.076. PubMed Associated Plasmids pAAVS1-TetOn-dCas9-KRAB pENTR2B-dCas9-KRAB
KLF4 protein stability regulated by interaction with pluripotency transcription factors overrides transcriptional control. Dhaliwal NK, Abatti LE, Mitchell JA. Genes Dev. 2019 Jun 20. pii: gad.324319.119. doi: 10.1101/gad.324319.119. PubMed Associated Plasmids Sox2-t2A-GFP Sox2-t2A-mCherry Klf2-t2A-mCherry CA-Stat3-t2A-mCherry Nanog-t2A-mCherry
Molecular mechanism for the multiple sclerosis risk variant rs17594362. Kim D, Park Y. Hum Mol Genet. 2019 Nov 1;28(21):3600-3609. doi: 10.1093/hmg/ddz216. PubMed
FGF primes angioblast formation by inducing ETV2 and LMO2 via FGFR1/BRAF/MEK/ERK. Chen PC, Hsueh YW, Lee YH, Tsai HW, Tsai KJ, Chiang PM. Cell Mol Life Sci. 2021 Mar;78(5):2199-2212. doi: 10.1007/s00018-020-03630-8. Epub 2020 Sep 10. PubMed
KRAS(G12C) Can Either Promote or Impair Cap-Dependent Translation in Two Different Lung Adenocarcinoma Cell Lines. Kyriakopoulos G, Katopodi V, Skeparnias I, Kaliatsi EG, Grafanaki K, Stathopoulos C. Int J Mol Sci. 2021 Feb 23;22(4). pii: ijms22042222. doi: 10.3390/ijms22042222. PubMed
Identifying oligodendrocyte enhancers governing Plp1 expression. Kim D, An H, Fan C, Park Y. Hum Mol Genet. 2021 Jul 6. pii: 6316230. doi: 10.1093/hmg/ddab184. PubMed
Generation of AAVS1 integrated doxycycline-inducible CRISPR-Prime Editor human induced pluripotent stem cell line. Bharucha N, Ataam JA, Gavidia AA, Karakikes I. Stem Cell Res. 2021 Nov 24;57:102610. doi: 10.1016/j.scr.2021.102610. PubMed
Comprehensive analysis of prime editing outcomes in human embryonic stem cells. Habib O, Habib G, Hwang GH, Bae S. Nucleic Acids Res. 2022 Jan 25;50(2):1187-1197. doi: 10.1093/nar/gkab1295. PubMed
Isogenic human SNCA gene dosage induced pluripotent stem cells to model Parkinson's disease. Zafar F, Nallur Srinivasaraghavan V, Yang Chen M, Alejandra Morato Torres C, Schule B. Stem Cell Res. 2022 Apr;60:102733. doi: 10.1016/j.scr.2022.102733. Epub 2022 Mar 1. PubMed
Generation of a dual edited human induced pluripotent stem cell Myl7-GFP reporter line with inducible CRISPRi/dCas9. Metzl-Raz E, Bharucha N, Arthur Ataam J, Gavidia AA, Greenleaf WJ, Karakikes I. Stem Cell Res. 2022 May;61:102754. doi: 10.1016/j.scr.2022.102754. Epub 2022 Mar 18. PubMed
Active endogenous retroviral elements in human pluripotent stem cells play a role in regulating host gene expression. Zhang T, Zheng R, Li M, Yan C, Lan X, Tong B, Lu P, Jiang W. Nucleic Acids Res. 2022 May 20;50(9):4959-4973. doi: 10.1093/nar/gkac265. PubMed
Identifying an oligodendrocyte enhancer that regulates Olig2 expression. Fan C, Kim D, An H, Park Y. Hum Mol Genet. 2023 Feb 19;32(5):835-846. doi: 10.1093/hmg/ddac249. PubMed
CRISPRi Gene Modulation and All-Optical Electrophysiology in Post-Differentiated Human iPSC-Cardiomyocytes. Han JL, Heinson YW, Chua CJ, Liu W, Entcheva E. bioRxiv. 2023 May 9:2023.05.07.539756. doi: 10.1101/2023.05.07.539756. Preprint. PubMed
Targeting the glycine-rich domain of TDP-43 with antibodies prevents its aggregation in vitro and reduces neurofilament levels in vivo. Riemenschneider H, Simonetti F, Sheth U, Katona E, Roth S, Hutten S, Farny D, Michaelsen M, Nuscher B, Schmidt MK, Flatley A, Schepers A, Gruijs da Silva LA, Zhou Q, Klopstock T, Liesz A, Arzberger T, Herms J, Feederle R, Gendron TF, Dormann D, Edbauer D. Acta Neuropathol Commun. 2023 Jul 11;11(1):112. doi: 10.1186/s40478-023-01592-z. PubMed
CRISPRi gene modulation and all-optical electrophysiology in post-differentiated human iPSC-cardiomyocytes. Han JL, Heinson YW, Chua CJ, Liu W, Entcheva E. Commun Biol. 2023 Dec 7;6(1):1236. doi: 10.1038/s42003-023-05627-y. PubMed
OptoDyCE-plate as an affordable high throughput imager for all optical cardiac electrophysiology. Heinson YW, Han JL, Entcheva E. J Mol Cell Cardiol Plus. 2023 Dec;6:100054. doi: 10.1016/j.jmccpl.2023.100054. Epub 2023 Nov 9. PubMed

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