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Michael Aregger Lab: An Optimized Cas12a Toolkit for Scalable Combinatorial Genetic Screening and Single-Cell Transcriptomics

Aregger M.
Unpublished

Plasmids from Article

ID Plasmid Purpose
248896pLenti-D156R LbCas12a-8xNLSLentiviral vector expressing human codon-optimized D156R LbCas12a with 8xNLS
248897pLenti-hyper LbCas12a-8xNLSLentiviral vector expressing human codon-optimized hyper LbCas12a with 8xNLS
248898plenti-ALFA-SpdCas9-2xNLSLentiviral vector expressing human codon-optimized, ALFA-tagged SpdCas9 (deactivated DNAse domain)
248899pLenti-D156R LbdCas12a-8xNLS-ALFALentiviral vector expressing human codon-optimized, ALFA-tagged D156R LbdCas12a (deactivated DNAse domain)
248900pLenti-hyper LbdCas12a-8xNLS-ALFALentiviral vector expressing human codon-optimized, ALFA-tagged hyper LbdCas12a (deactivated DNAse domain)
248901plenti-ZIM3-SpdCas9-2xNLSLentiviral vector expressing human codon-optimized SpdCas9 (deactivated DNAse domain) fused to ZIM3 KRAB domain
248902pLenti-D156R LbdCas12a-8xNLS-ZIM3Lentiviral vector expressing human codon-optimized D156R LbdCas12a (deactivated DNAse domain) fused to ZIM3 KRAB domain
248903pLenti-hyper LbdCas12a-8xNLS-ZIM3Lentiviral vector expressing human codon-optimized hyper LbdCas12a (deactivated DNAse domain) fused to ZIM3 KRAB domain
248904pLCHKOv6Lentiviral backbone for expressing U6 driven hybrid guide (hg)RNAs with BveI cloning sites and puromycin selection marker
248905pLCHKOv6_ZIM3-NbALFALentiviral backbone for expressing U6 driven hybrid guide (hg)RNAs with BveI cloning sites and puromycin selection marker, alongside hpGK driven ZIM3 KRAB domain (CRISPRi) fused to an ALFA nanobody.
248906pLCHKOv6_miniVPR-NbALFALentiviral backbone for expressing U6 driven hybrid guide (hg)RNAs with BveI cloning sites and puromycin selection marker, alongside hpGK driven miniVPR (CRISPRa) fused to an ALFA nanobody.
248907pLCHKOv6_miniVPR-NbALFA_tetO-EGFPLentiviral backbone for expressing U6 driven hybrid guide (hg)RNAs with BveI cloning sites and puromycin selection marker, alongside hpGK driven miniVPR fused to ALFA nanobody, and tetO EGFP reporter.

Antibodies from Article