Deep Dive: qPCR
Type
Blog Post
...
Yes
Agarose gel or uMelt analysis
Hairpin probes
Low
Yes, one
Yes
Yes
Agarose gels
...another means, such as an agarose gel or uMelt analysis (Downey, 2014).
Agarose gels
A quick way to validate...double-quencher design
Yes, one
Yes
Yes
Agarose gel or uMelt analysis
dsDNA dye (Sybr)
High...structure included in the 5’ primer
Yes
Yes.
Agarose gel
LUX fluorogenic primers
Low
Single...fluorescent molecule connected to a primer
No
Yes
Agarose gel
Sunrise primers
Low
Reporter and ...hairpin structure included in primer
Yes
Yes
Agarose gel
Table 1: Features of various qPCR chemistries...primer probe is by running your qPCR product on an agarose gel, then cutting out and sequencing the band for...