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  1. Hot Plasmids April 2018 - Protein Degradation, Nanoscopy, FIRE-Cas9, and Yeast Expression Tools

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    Blog Post
    ...endogenous TRIM21 is sufficient for TRIM-Away, and you only need to deliver the target antibody. TRIM-Away ... proteasome function. TRIM-away compared favorably to drug inhibition, with TRIM-away targeting of mTOR...hope they will TRIM down the difficulty of your protein knockdown experiments! The TRIM-Away plasmids ...antibody. TRIM21, an E3 ubiquitin ligase, is the basis of TRIM-away. In normal physiology, TRIM21 recruits... methods for TRIM-Away delivery. For small cell populations, co-microinjection of TRIM21 protein and the...time to read? Listen to our Hot Plasmids Podcast! TRIM-Away: Targeted endogenous protein degradation Article...Article contributed by Mary Gearing Listen to the TRIM-Away podcast segment CRISPR and RNAi have helped...
  2. Trimmer Lab NeuroMab Collection

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    Collection
    ...The NeuroMab Facility and James Trimmer have produced monoclonal antibodies validated for neuroscience...Collection NeuroMab Plasmid Collection NeuroMab/Trimmer Lab Plasmid Collection R-mAb Plasmids scFv Plasmids...the laboratory of NeuroMab Director, Dr. James Trimmer, have produced numerous monoclonal antibodies (...e9. PMID: 11788735 (Link opens in a new window) Trimmer J, et al. 2020. Recombinant Antibodies in Basic...
  3. Bioinformatics at Addgene

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    Blog Post
    ... developed for a singular purpose (ex. adapter trimming, quality score analysis, k-mer counting, or sequence...process. For example, our bbduk process created trimmed FASTQ files as output, which we specified as input...
  4. 15 Hot Plasmids from 2017

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    Blog Post
    ... of telomere length regulation called telomere trimming and have proposed a role for TZAP, a Kruppel-like...regulating the upper-bound of telomere length. Telomere trimming can be assayed by looking for the production of...
  5. Building and Validating Recombinant Antibodies: A Case Study

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    Blog Post
    ...validation of some of these tools created by the Trimmer Lab that will be the first antibodies distributed...constructing the plasmids for expression of mAbs, the Trimmer lab isolated RNA from cryopreserved hybridomas,...can be a threat to future reproducibility. The Trimmer Lab found that in addition to recovering RNA from...lab’s entire hybridoma collection. Instead, the Trimmer Lab moved to direct functional validation by immunofluorescence-immunocytochemistry...subsequently cloned into the expression constructs. The Trimmer lab found that the recognition sequence for the...webpage. Importantly, the methods developed by the Trimmer Lab for construction and validation of R-mAb expressing...with different mAbs in the same experiment. The Trimmer Lab found that they could modify the CH encoding...
  6. Addgene Receives NIH BRAIN Initiative Grant to Create Open-Access Recombinant Antibody Resource

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    Blog Post
    ...James Trimmer of the University of California Davis School of Medicine on this grant. Dr. Trimmer has created... ready-to-use-proteins to facilitate use. Dr. Trimmer’s lab will ensure the quality of the antibodies ...Addgene to bring this resource to life,” says Dr. Trimmer. But in order to create such a resource, we need...Initiative has been funding laboratories, such as Dr. Trimmer’s lab, to create recombinant antibodies for use ..., Bestagno M, Burrone O, Maynard J, Ferrara F, Trimmer JS, Görnemann J, Glanville J, Wolf P, Frenzel A...
  7. GPCRs: How Do They Work and How Do We Study Them?

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    Blog Post
    ...coupled with heterotrimeric G proteins on the intracellular side of the cell membrane. Heterotrimeric G proteins...in signal transduction pathways and consist of a trimer of three subunits: alpha (Gα), beta (Gβ), and gamma...the GPCR allows for binding of a new inactive heterotrimeric G protein complex and subsequently another ...elucidate the role of 14 of the 16 non-visual heterotrimeric G proteins that can be activated downstream... alpha, 2 beta, and 4 gamma subunits of the heterotrimeric G protein complex that can be used to detect...
  8. Understanding GPCR Signaling Using TRUPATH

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    Blog Post
    ... al., 2020). A transducer complex consists of a trimer of three subunits: alpha, beta, and gamma (Gα, ..., Gβ, and Gγ), collectively known as a heterotrimeric G protein. This complex converts a signal received.... When inactive, these subunits are found in a trimeric complex bound to the intracellular surface of ...called BRET2. Figure 1: TRUPATH measures heterotrimeric G protein dissociation by bioluminescence resonance...
  9. Mobile-CRISPRi: Bringing CRISPRi to Diverse Bacteria

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    Blog Post
    ...presence of trimethoprim, cultures treated with a folA gRNA were more sensitive to trimethoprim when compared... which encodes the target for the antibiotic trimethoprim. When Enterobacter aerogenes, Klebsiella pneumoniae... the folA gene product not been a target for trimethoprim, there would be no changes in sensitivity. Pooled...
  10. Neurodegeneration Plasmid Collection

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    Collection
    ...James Trimmer 177520 Anti-LRRK2/Dardarin, C-terminus [N241A/34R] LRRK2 CMV Parkinson's James Trimmer 177537...Spinocerebellar ataxia James Trimmer 177546 Anti-PINK1 [N4/15R] PINK1 CMV Parkinson's James Trimmer 177653 pT7II-2N4Rtau...James Trimmer 182104 Anti-LRRK2/Dardarin, N-terminus [N138/6R] LRRK2 CMV Parkinson's James Trimmer 182113...Spinocerebellar ataxia 19 James Trimmer 188163 Anti-VAPA/B [N479/107R] VAPB CMV ALS James Trimmer 188167 Anti-IP3 receptor...ataxia James Trimmer 196946 Kv4.3 long/RBG4 KCND3 CMV Spinocerebellar ataxia 19 James Trimmer 197107 iYFP-Parkin...19 James Trimmer 206543 Anti-LRRK2/Dardarin, N3 [N231B/34R] LRRK2 CMV Parkinson's James Trimmer 206623 ... James Trimmer 206681 Anti-Kv1.1 K+ channel [K20/78R-1] KCNA1 CMV Episodic ataxia James Trimmer 206684...
  11. Addgene Begins Distribution of Recombinant Antibodies

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    Blog Post
    ...antibodies available at launch were created by James Trimmer, PhD, of the University of California Davis School... Figure 1: Antibody against PSD-95 from the Trimmer Lab. Information about the antibody, the target...Nguyen K, van der List D, Murray KD, Engebrecht J, Trimmer JS (2019) A toolbox of IgG subclass-switched recombinant...
  12. Fluorescent Proteins 101: GFP Fusion Proteins - Making the Right Connection

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    ...Bendezú et al., 2015) and the alpha subunit of heterotrimeric G-proteins (Janetopoulos et al., 2001, Adjobo-Hermans...Merel JW, et al. "Real-time visualization of heterotrimeric G protein Gq activation in living cells." BMC...Devreotes. "Receptor-mediated activation of heterotrimeric G-proteins in living cells." Science 291.5512...
  13. Live and Let Dye: Self-Labeling Protein Tags

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    ...with fluorescent derivatives of its substrate trimpethoprim (TMP-tag) (Miller et al., 2005). Although this...Benzylguanine (BG) Many Easy eDHFR 159 Trimpethoprim  (TMP-tag) Few Easy HaloTag 295 ... V. W. (2005). In vivo protein labeling with trimethoprim conjugates: A flexible chemical tag. Nature ...
  14. Fluorescent Protein Guide: FRET

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    Collection
    ... super-REACh via a 10 amino acid linker ACA Heterotrimeric construct consisting of Amber-5aa linker-Cerulean...linker-Cerulean-6aa linker-Amber ACV Heterotrimeric construct consisting of Amber-5aa linker-Cerulean-6aa linker-Venus...linker-Venus VCA Heterotrimeric construct consisting of Venus-5aa linker-Cerulean-6aa linker-Amber VCV ...VCV Heterotrimeric construct consisting of Venus-5aa linker-Cerulean-6aa linker-Venus ACAV Heterotetrameric...
  15. Antibodies 101: Producing Recombinant Antibodies

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    ...reliable expression, and easy distribution as DNA (Trimmer, 2020), you may be interested in using them in ...Purification Protocol Addgene's Antibody Guide References Trimmer JS. Recombinant Antibodies in Basic Neuroscience...
  16. Fluorescent Proteins 101: When GFP lets you down

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    Blog Post
    ...have successfully generated several functional heterotrimeric G-alpha subunit fusions that do not tolerate...Merel JW, et al. "Real-time visualization of heterotrimeric G protein Gq activation in living cells." BMC...
  17. Hot Plasmids: Summer 2024

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    ...anti-GFAP [N206A/8R] antibody shared by James Trimmer’s lab (Figure 5) as well as antibodies for identifying...N206A/8 TC Supernatant). Image attribution: James Trimmer, UC Davis.   ...
Showing: 1 - 20 of 54 results