Hijacking of transcriptional condensates by endogenous retroviruses.
Asimi V, Sampath Kumar A, Niskanen H, Riemenschneider C, Hetzel S, Naderi J, Fasching N, Popitsch N, Du M, Kretzmer H, Smith ZD, Weigert R, Walther M, Mamde S, Meierhofer D, Wittler L, Buschow R, Timmermann B, Cisse II, Ameres SL, Meissner A, Hnisz D
Nat Genet. 2022 Aug;54(8):1238-1247. doi: 10.1038/s41588-022-01132-w. Epub 2022 Jul 21. PubMed Article
Asimi V, Sampath Kumar A, Niskanen H, Riemenschneider C, Hetzel S, Naderi J, Fasching N, Popitsch N, Du M, Kretzmer H, Smith ZD, Weigert R, Walther M, Mamde S, Meierhofer D, Wittler L, Buschow R, Timmermann B, Cisse II, Ameres SL, Meissner A, Hnisz D
Nat Genet. 2022 Aug;54(8):1238-1247. doi: 10.1038/s41588-022-01132-w. Epub 2022 Jul 21. PubMed Article
Plasmids from Article
| ID | Plasmid | Purpose |
|---|---|---|
| 185002 | pX458-IAP-del-gRNA1 | expression of gRNA and Cas9 from S. pyogenes with 2A-EGFP |
| 185003 | pX458-IAP-del-gRNA2 | expression of gRNA and Cas9 from S. pyogenes with 2A-EGFP |
| 185004 | pX458-MMERVK9C-del-gRNA1 | expression of gRNA and Cas9 from S. pyogenes with 2A-EGFP |
| 185005 | pX458-MMERVK9C-del-gRNA2 | expression of gRNA and Cas9 from S. pyogenes with 2A-EGFP |
| 185006 | pX458-MMETn-del-gRNA1 | expression of gRNA and Cas9 from S. pyogenes with 2A-EGFP |
| 185007 | pX458-MMETn-del-gRNA2 | expression of gRNA and Cas9 from S. pyogenes with 2A-EGFP |
| 185008 | pUC19.TRIM28.FKBP.knock-in.mRuby2 | For knocking in FKBP F36V P2A mRuby2 |
| 185009 | pUC19.TRIM28.FKBP.knock-in.mCerulean | For knocking in FKBP F36V P2A mCerulean |
| 185010 | pX458-GFP-TRIM28 | Encodes gRNA for mouse TRIM28 along with Cas9 with 2A-EGFP |
| 185011 | pET-45b-POLR2A-CTD-mCherry | Bacterial Expression of 6xHis C-terminal domain of POLR2A mCherry Fusion Protein |
| 185012 | pET-45b-HP1a-mCherry | Bacterial Expression of 6xHis CBX5 (HP1a) mCherry Fusion Protein |
| 185013 | pET-45b-mEGFP | Bacterial Expression of 6xHis Sirius-GFP Fusion Protein |
| 185015 | pET-45b-NFYC-IDR-mEGFP | Bacterial Expression of 6xHis NFYC IDR Sirius-GFP Fusion Protein |
| 185016 | pLKO.1-Tet-Puro-shIAPEz_1 | shRNA mediated knockdown |
| 185017 | pLKO.1-Tet-Puro-shIAPEz_2 | shRNA mediated knockdown |
| 185018 | pLKO.1-Tet-Puro-shMMETn_1 | shRNA mediated knockdown |
| 185019 | pLKO.1-Tet-Puro-shMMETn_2 | shRNA mediated knockdown |
| 185020 | pLKO.1-Tet-Puro-shMMERVK10c_1 | shRNA mediated knockdown |
| 185021 | pLKO.1-Tet-Puro-shMMERVK10c_2 | shRNA mediated knockdown |
| 185022 | pLKO.1-Tet-Puro-shMMERVK9c_1 | shRNA mediated knockdown |
| 185023 | pLKO.1-Tet-Puro-shMMERVK9c_2 | shRNA mediated knockdown |
| 189953 | pLKO.1-Tet-Puro-shMMETn_1 (inducible) | shRNA mediated knockdown |
| 189954 | pLKO.1-Tet-Puro-shMMETn_2 (inducible) | shRNA mediated knockdown |
| 189955 | pLKO.1-Tet-Puro-shMMERVK10c_1 (inducible) | shRNA mediated knockdown |
| 189956 | pLKO.1-Tet-Puro-shMMERVK10c_2 (inducible) | shRNA mediated knockdown |
| 189957 | pLKO.1-Tet-Puro-shMMERVK9c_1 (inducible) | shRNA mediated knockdown |
| 189958 | pLKO.1-Tet-Puro-shMMERVK9c_2 (inducible) | shRNA mediated knockdown |