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We narrowed to 821 results for: EED

Showing: 81 - 100 of 821 results
  1. Antibody Guide

    Type
    Guide
    ...process may need to be optimized for individual assays. Clear cell debris by sedimentation. Proceed with IP..., an antimicrobial agent, can block some amines needed for conjugation reactions and should be removed...chosen. Signal Amplification The amount of signal needed from a specific antibody can vary depending on ...category, including an outline of the basic steps needed for each application, important controls, and any...samples to make proteins available. Tissue samples may need additional processing steps, such as sonication....signal levels. In ChIPseq, an input control will need to be collected before immunoprecipitation. Antibody...from. Then consider the following questions: Do you need polyclonal or monoclonal antibodies? Will you be...
  2. Adenovirus Guide

    Type
    Guide
    ...therefore needs to be supplied through other means. In order to produce rAdV vectors, E1 needs to be expressed...especially when needing transgenes to express for a shorter period of time or when needing to package larger...starts and primarily encode for structural proteins needed to assemble icosahedral capsids and build new virions...acronyms, so if you're new to viral vectors or simply need a refresher, we've included a glossary at the end... In order to produce rAdV vectors, you generally need two plasmids: Shuttle plasmid (also known as transfer...produced in high titers for their use in experiments. Needle sticks and ripped gloves are common points of entry...system for generating recombinant adenoviruses . Proceedings of the National Academy of Sciences of the United...
  3. Gamma-Retroviral Vector Guide

    Type
    Guide
    ...acronyms, so if you're new to viral vectors or simply need a refresher, we've included a glossary at the end...In order to produce gamma-retroviral vectors, you need three plasmids (Figure 2): Transfer plasmid — contains...stably express gag-pol and/or env , eliminating the need to deliver these genes on separate plasmids ( in...with contact to mucous membranes or broken skin. Needle sticks and ripped gloves are common points of entry...clinical-grade gamma-retroviral vector purification by high-speed centrifugation for CAR T cell manufacturing. Molecular...specificity of infection for CD4-expressing cells. Proceedings of the National Academy of Sciences , 94 (16)...the beginning of R, has a 5' cap structure, and proceeds through U5 and the rest of the provirus. Some ...
  4. CRISPR Guide

    Type
    Guide
    ...requirements for a CRISPR knockout assay are simple. You’ll need a Cas enzyme and a gRNA specific to the gene of ...Cas9-gRNA complex binds a putative DNA target, the seed sequence (8–10 bases at the 3′ end of the gRNA targeting...) will begin to anneal to the target DNA. If the seed and target DNA sequences match, the gRNA will continue...Mismatches between the target sequence in the 3′ seed sequence inhibit target cleavage, while mismatches...NHEJ directly ligates the break ends without the need for a homologous template. Both NHEJ and HDR have... the depositing lab. After amplification, you’ll need to use next-generation sequencing (NGS) to verify...matches that of the original library. Next, you’ll need to generate lentivirus containing the entire library...
  5. Lentiviral Vector Guide

    Type
    Guide
    ...acronyms, so if you're new to viral vectors or simply need a refresher, we've included a glossary at the end...table . In order to produce lentiviral vectors, you need three (or four, for third generation) plasmids: ...heterologous promoter (often CMV or RSV), eliminating the need for transactivation by Tat. Most third-generation...Biology Reference . Production After cloning, you will need to produce the lentiviral vectors from your plasmids...with contact to mucous membranes or broken skin. Needle sticks and ripped gloves are common points of entry...definition, at the beginning of R, is capped, and proceeds through U5 and the rest of the provirus. Third-generation...
  6. Adeno-associated virus (AAV) Guide

    Type
    Guide
    ...acronyms, so if you're new to viral vectors or simply need a refresher, we've included a glossary at the end...order to produce rAAV vectors, three plasmids are needed: Transfer plasmid (also known as cis plasmid) —.... The cell line used for rAAV vector production needs to express the adenovirus E1 gene, which is crucial...especially if any additional regulatory elements are needed. One strategy to overcome this obstacle, has been...with contact to mucous membranes or broken skin. Needle sticks and ripped gloves are common points of entry...
  7. Molecular Cloning Techniques

    Type
    Guide
    ...is usually an ideal approach. This may be due to speed, cost, availability of starting materials, or just...compatible ends together. TOPO cloning thus does not need restriction enzymes or an exogenous ligase, providing... of PCR products into donor plasmids without the need for restriction enzyme cloning. Read more in our...the chosen orientation at a time, and without the need for any unwanted sequence at the junctions (such...
  8. Optogenetics Guide

    Type
    Guide
    ...Channelrhodopsin from Volvox carteri 570 Chronos High-speed, light-sensitive channel from Stigeoclonium helveticum...When designing your optogenetics experiment, you'll need to pick both an opsin and a delivery system. Here...experimental design will determine whether you'll need short or long periods of neuronal activation/inactivation...Optogenetics Plasmid Collection to find the plasmids you need. Looking for viral preps? We also offer ready-to-use...
  9. Addgene's eBook Collection

    Type
    Guide
    ...Not sure where to start? Need a quick reference? Addgene's eBooks are here to help!... Collection Not sure where to start? Need a quick reference? Addgene's eBooks are here to help! 0 of 0...101 blog series, this eBook covers everything you need to know about plasmids, from parts, nomenclature...
  10. Chemogenetics Guide

    Type
    Guide
    ...back-metabolism of CNO to clozapine, demonstrating the need for alternative DREADD ligands. Compound 21, deschloroclozapine...while PSAMs have more than one domain, both of which need to be expressed. However, neuronal control through...experiment, an AAV-encoded chemogenetic plasmid may need to be targeted to specific tissues, cell types or...
  11. Antibodies 101: Flow Compensation

    Type
    Blog Post
    ...will need compensation? To know if you will need to compensate in your flow panel, you will need to know...would say that APC is “bleeding,” or spilling over, into APC-Cy7 channel and needs to be compensated out...this bleed. A compensation value of 3.7 for APC into APC-Cy7 applied next, which fixed the bleed in this...fluorescent markers are read by the same laser, they will need to be compensated for one another. This overlap ...fluorophores FITC and PE on the same laser, you will need to compensate between the two of them because they...reads them out on different lasers, you should not need to compensate between them. Another rule of thumb...of the fluorescent markers are similar, you will need to compensate between them (although there are exceptions...
  12. How to Negotiate a Successful Lab Start Up Budget

    Type
    Blog Post
    ...Identify the skills needed to use these tools Outline the knowledge and skill sets needed to do your science...that you’ll need to tap for your future research team. For example, if you’re going to need a tech because...Experiment Designs Consulting, Inc. “How much do you need [for your lab start up]?” A hiring chair or dean...doesn’t have to be this way, if you know what you need. Most often, early career scientists aren’t trained...instead have our clients focus on their experimental needs and consider a budget as a resource checklist. A... budget is an account of the material resources needed to accomplish your science, and can include: equipment...discussion first defines the material resources needed, then determines how much those resources will ...
  13. Tips for arabidopsis transformation

    Type
    Blog Post
    ... germline Selecting for seeds that have the tDNA insertions (usually via seed growth on antibiotic-containing...fungal growth. Healthy plants produce lots of seeds. More seeds mean more chances to recover a transformant...of time to produce seeds after you expose the flowers to Agrobacterium. More seeds mean more chances to...produce lots of seeds. I typically use 8-10 plants per construct I transform. More seeds mean more chances... transformants based on expression of RFP in the seed (Emami, Yee and Dinneny, 2013). Preparing plants...transformation efficiency. If you see many mature siliques (seed pods), your plants may be too old to transform. ...mature prior to transformation are just full of seeds that you know won’t harbor your transgene. You can...
  14. Transferable Skills Guide: Managing a Team

    Type
    Blog Post
    ...timely feedback. We often associate feedback with end-of-the-year performance review, but feedback should...assume that reports want to succeed at work and providing feedback is needed for that. In many cases reports... for the feedback, but at least you can start making changes for the best. Positive feedback is equally...you team feel safe. Your team members need to trust you and you need to encourage them to speak their minds... and by offering advice on areas where you might need some help. Today in our transferable skills guide...! I was a poor delegator at first. I knew what needed to be done and how to prioritize but I  just added... is no way around the fact that new team members need to be trained, which may seem like a waste of your...
  15. RUBY-Red Siliques

    Type
    Blog Post
    ...that can’t set seeds. I study the development of the mutant plants, but the seeds needed for experiments...the green seedlings that don’t have the transgene and save the red seedlings to collect seed for further...RUBY-expressing Arabidopsis seed following floral dip transformation next to an untransformed seed from the same plant...genes usually involves killing the untransformed seedlings or callus (undifferentiated plant cell culture...dip). In the next generation the CRISPR construct needs to be segregated away to prevent continued production...simplify the identification of these mutants will speed up my work and make it easier to study these mutants... plants will be red and will be able to produce seeds. However, they will not be useful to study because...
  16. Troubleshooting and Optimizing a Western Blot

    Type
    Blog Post
    ...you can optimize or troubleshoot a western, you’ll need to be familiar with running a gradient, which will...proteins are nuclear- or DNA-binding proteins, you may need to sonicate your lysates in order to release the...optimal gel for your experiment.   Ladders If you need very accurate protein measurements, consider using...visualize them with a conjugated antibody. If you do not need such precise measurements, you can use a colorimetric...left-hand corner with a pencil (not a pen — they bleed!), cut off the upper left-hand corner, or place ...troubleshooting step to take. If you’re not sure if you need a smaller pore on your membrane, run a double-membrane...stick to the membrane by stripping away the SDS. To speed up larger proteins and prevent them from under-transferring...
  17. Viral Vectors 101: Virus Safety

    Type
    Blog Post
    ...materials, you’ll need to use aerosol-tight caps, compatible with your centrifugation speed, to cover the ...plasmid (packaging plasmid). Viral production then proceeds by transfection of all three plasmids into a producer...proto-oncogenes, which can lead to cancer. These viruses need to be handled in a BSL-2 (or BSL-2+) lab and require... your lab coats and double gloving, so that, if needed, a layer can quickly be removed and disposed of...materials, such as lentivirus. Most of this work will need to be done in a biosafety cabinet. Many researchers...to be done outside of a biosafety cabinet, you’ll need to take extra steps to ensure that particles are.... Finally, when spinning down lentivirus, you’ll need to use centrifuge bin covers, which you should open...
  18. Early Career Researcher Toolbox: Finding Relevant Papers

    Type
    Blog Post
    ...of interest. You can also just follow feeds curated by Meta. Feeds automatically update as papers are published...personalized feed is simple. You can enter as many search terms as you like, and your feed will update ...your feed which means only papers than contain all of your search terms will show up in your feed. Feeds...score, is also displayed in your feed. By clicking on a paper in your feed you can see suggested related ...characters! Using Twitter to find papers  You’ll need to start following relevant accounts in order to...search engine. Instead, you create your own research feed by entering keywords, concepts, journals, and/or... to help you expand your search. Results in your feed are ranked based on their influence on the network...
  19. Technical Design of a Western Blot

    Type
    Blog Post
    ...method to another or change primary antibodies as needed. However, more antibodies mean more optimization...can be more difficult to source, especially if you need a specific conjugate, and changing your reporter...preparation Before you can blot your proteins, you’ll need to lyse and denature them. If you are intentionally...you are quantifying your western blot data, you’ll need to determine the linear detection range of your ...to the other.  Type of gel The type of gel you’ll need depends mostly on the weight of the proteins you... each other. Once you know your gel type, you’ll need to pick the percentage. You can get a single-percentage... 4–20% gradient   Handcast or premade If you need a gradient gel, the decision is probably already...
  20. Replacing Paper: Tips for Choosing an Electronic lab Notebook

    Type
    Blog Post
    ...exactly your lab needs from an ELN (the full article is available here):   Does your lab need to keep paper...exported or printed from the ELN when needed. Whether it is because you need to keep paper records as well as...to do it when needed. How many people from your lab would use the ELN i.e. do you need a system that ...research? Electronic lab notebooks and researcher's needs The familiar paper-based lab notebook is still a...institutions tend to think about the long term, so they need a solution for which they are sure that there will...electronic lab notebook starts with defining your lab’s needs The values of ELNs show in the long run as they ...currently exchanging information with your team? If you need to exchange information regarding lab work with ...
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