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opt.a_pSTC0-zeo

Plasmid

#202347

Purpose

Design opt.a (greedy optimization without distance constraints) in modified pSTC0 vector in which kan resistance cassette is replaced with zeo resistance cassette

Depositor

Nicholas Gauthier

Article

Fram et al Nat Commun. 2024 Jun 20;15(1):5141. doi:

Insert

opt.a

Available Since

June 26, 2024

Availability

Academic Institutions and Nonprofits only

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opt.b_pSTC0-zeo

Plasmid

#202348

Purpose

Design opt.b (parallel tempering optimization without distance constraints) in modified pSTC0 vector in which kan resistance cassette is replaced with zeo resistance cassette

Depositor

Nicholas Gauthier

Article

Fram et al Nat Commun. 2024 Jun 20;15(1):5141. doi:

Insert

opt.b

Available Since

June 26, 2024

Availability

Academic Institutions and Nonprofits only

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neg.ctrl_pSTC0-zeo

Plasmid

#202350

Purpose

Control neg. ctrl (negative control S70A) in modified pSTC0 vector in which kan resistance cassette is replaced with zeo resistance cassette

Depositor

Nicholas Gauthier

Article

Fram et al Nat Commun. 2024 Jun 20;15(1):5141. doi:

Insert

neg. ctrl

Available Since

June 26, 2024

Availability

Academic Institutions and Nonprofits only

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pWR23

Plasmid

#202770

Purpose

episomal bioluminescent reporter plasmid for S. stipitis

Depositor

J. Brian Robertson

Article

Reichard et al mSphere. 2023 Aug 24;8(4):e0022423. doi:

Inserts

TEF1 promoter (S. stipitis) (TEF1 S. stipitis (yeast))
coKanMX
ACT1 terminator (S. stipitis)
TDH3 promoter (S. stipitis)
coCBG
ADH2 terminator (S. stipitis)
ARS from S. stipitis chromosome 1

Expression

Yeast

Available Since

June 25, 2024

Availability

Academic Institutions and Nonprofits only

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AAV-APOBEC1-YTHmut-EGFP

Plasmid

#209323

Purpose

AAV packaging vector containing a APOBEC1-YTHmut expression cassette, a P2A-EGFP expression cassette.

Depositor

Magdalena Koziol

Article

Feng et al Genome Res. 2024 Jul 23;34(6):822-836. d

Insert

APOBEC1--YTHmut-HA

Use

AAV

Tags

HA

Mutation

YTH domain lacks AA 385-409 comprising the m6A-bi…

Available Since

May 7, 2024

Availability

Academic Institutions and Nonprofits only

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AAV-EGFP-APOBEC1-YTHmut

Plasmid

#209320

Purpose

AAV packaging vector containing a EGFP-P2A expression cassette, APOBEC1-YTHmut cassette.

Depositor

Magdalena Koziol

Article

Feng et al Genome Res. 2024 Jul 23;34(6):822-836. d

Insert

APOBEC1-YTHmut-HA

Use

AAV

Tags

HA

Mutation

YTH domain lacks AA 385-409 comprising the m6A-bi…

Available Since

May 7, 2024

Availability

Academic Institutions and Nonprofits only

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MTOR-F2108L_DARIC(1)_CD19-scFv_AAV6_Donor

Plasmid

#211905

Purpose

Vector for AAV6 donor production. Targeted CD19-scFv DARIC transgene integration to the MTOR locus with the dominant rapamycin resistance MTOR-F2108L mutation via homology-directed repair.

Depositor

Yannick Doyon

Article

Levesque et al bioRxiv 2023.09.14.557485

Insert

DARIC-CD19-scFv

Use

AAV

Expression

Mammalian

Promoter

hPGK1

Available Since

Feb. 5, 2024

Availability

Academic Institutions and Nonprofits only

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pS44i8GH-1

Plasmid

#207525

Purpose

Conditionally-replicating in Pseudomonas vector, high-copy-number; oriV(pRO1600/ColE1), xylS (cured of BsaI-sites), Pm→repA, P14b with a translational BCD2 coupler from BG35 (53)→msfGFP; SmR/SpR

Depositor

Pablo Ivan Nikel

Article

Kozaeva et al Nucleic Acids Res. 2024 Jan 5:gkad1236.

Insert

oriV(pRO1600/ColE1), xylS, Pm→repA, P14b with a translational BCD2 coupler from BG35 (53)→msfGFP;

Use

CRISPR; Pseudomonas vector

Available Since

Dec. 12, 2023

Availability

Academic Institutions and Nonprofits only

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pCR 2.1-TOPO Fzd6 N352A HA

Plasmid

#208365

Purpose

Extracellular HA-tagged Fzd6 N352A (mouse)

Depositor

Maureen Cetera, Danelle Devenport

Article

Cetera et al Development. 2023 Aug 25:dev.202078. doi

Insert

Fzd6 (Fzd6 Mouse)

Use

Cloning vector

Tags

HA

Mutation

Asparagine 352 to Alanine

Available Since

Dec. 8, 2023

Availability

Academic Institutions and Nonprofits only

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pCR 2.1-TOPO Fzd6 S354I HA

Plasmid

#208364

Purpose

Extracellular HA-tagged Fzd6 S354I (mouse)

Depositor

Maureen Cetera, Danelle Devenport

Article

Cetera et al Development. 2023 Aug 25:dev.202078. doi

Insert

Fzd6 (Fzd6 Mouse)

Use

Cloning vector

Tags

HA

Mutation

Serine 354 to Isoleucine

Available Since

Dec. 8, 2023

Availability

Academic Institutions and Nonprofits only

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pCR 2.1-TOPO Fzd6HA

Plasmid

#208363

Purpose

Extracellular HA-tagged Fzd6 (mouse)

Depositor

Maureen Cetera, Danelle Devenport

Article

Cetera et al Development. 2023 Aug 25:dev.202078. doi

Insert

Fzd6 (Fzd6 Mouse)

Use

Cloning vector

Tags

HA

Available Since

Dec. 8, 2023

Availability

Academic Institutions and Nonprofits only

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pMDC123-SUVH9-ZF

Plasmid

#200923

Purpose

Express SUVH9-ZF108 in Arabidopsis target FWA gene

Depositor

Steven Jacobsen

Article

Wang et al Nat Plants. 2023 Mar 6. doi: 10.1038/s41

Insert

SUVH9 (SUVH9 Mustard Weed)

Expression

Plant

Available Since

Nov. 21, 2023

Availability

Academic Institutions and Nonprofits only

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pLenti_CHyMErA_U6(SpCas9_I-SceI)-(AsCas12_PacI)_PGK-puro

Plasmid

#189634

Purpose

Lentiviral expression of single SpCas9 and AsCas12a gRNAs for generating combinatorial CHyMErA 3Cs libraries

Depositor

Manuel Kaulich

Article

Cetin et al Sci Rep. 2023 May 6;13(1):7405. doi: 10.

Insert

hU6 Cas9-Cas12a gRNA cassette, PGK puro cassette

Use

CRISPR and Lentiviral

Expression

Mammalian

Available Since

Nov. 16, 2023

Availability

Academic Institutions and Nonprofits only

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Control V5-Twist

Plasmid

#201376

Purpose

Expresses Twist for nucleocytoplasmic transport studies

Depositor

Pere Roca-Cusachs

Article

Andreu et al Nat Cell Biol. 2022 Jun;24(6):896-905. d

Insert

Twist (Twist1 Mouse)

Tags

V5

Expression

Mammalian

Available Since

July 10, 2023

Availability

Academic Institutions and Nonprofits only

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pRA1SEGFPTcIfm

Plasmid

#193777

Purpose

Cassette 1: Expresses EGFP under the control of PR promoter, Cassette 2: Expresses frame-shifted CI under the control of PLTetO-1 promoter, pUC origin of replication, Ampicillin selection

Depositor

Sangram Bagh

Article

Sarkar et al J Biol Eng. 2019 Mar 1;13:20. doi: 10.11

Insert

EGFP and frame-shifted CI in opposite orientation, controlled by separate promoters and terminators

Use

Synthetic Biology

Expression

Bacterial

Promoter

PR promoter and PLTetO-1

Available Since

April 10, 2023

Availability

Academic Institutions and Nonprofits only

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pMSCV puro PRDM14 ΔZinc finger domain

Plasmid

#193679

Purpose

Constitutive retroviral expression of PRDM14

Depositor

William Hahn

Article

Kim et al Dev Cell. 2022 Jan 24;57(2):212-227.e8.

Insert

PRDM14 (PRDM14 Human)

Use

Retroviral

Mutation

Deletion of Zinc finger domain

Available Since

Jan. 3, 2023

Availability

Academic Institutions and Nonprofits only

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pKI-cjT-tdTomato-PGK-Neo

Plasmid

#186173

Purpose

Knock-in gene targeting in marmoset cells at TBXT locus

Depositor

Sho Yoshimatsu

Article

Yoshimatsu et al Biology (Basel). 2022 Jun 29;11(7):987.

Insert

tdTomato

Use

Marmoset targeting

Available Since

Dec. 5, 2022

Availability

Academic Institutions and Nonprofits only

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pKI-cjOSR1-EGFP-PGK-Puro

Plasmid

#186170

Purpose

Knock-in gene targeting in marmoset cells at OSR1 locus

Depositor

Sho Yoshimatsu

Article

Yoshimatsu et al Biology (Basel). 2022 Jun 29;11(7):987.

Insert

EGFP

Use

Marmoset targeting

Available Since

Dec. 5, 2022

Availability

Academic Institutions and Nonprofits only

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pKI-cjSF1-tdTomato-PGK-Neo

Plasmid

#186172

Purpose

Knock-in gene targeting in marmoset cells at SF1 locus

Depositor

Sho Yoshimatsu

Article

Yoshimatsu et al Biology (Basel). 2022 Jun 29;11(7):987.

Insert

tdTomato

Use

Marmoset targeting

Available Since

Nov. 30, 2022

Availability

Academic Institutions and Nonprofits only

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pWPT-mEGFP

Plasmid

#190606

Purpose

Obtained by creating a deletion inside the mCherry coding sequence in pWPT-/GCCACC-mEGFP-IRES-mCherry (Addgene #49235)

Depositor

Alessandro Quattrone

Article

Ambrosini et al Nucleic Acids Res. 2022 Oct 14;50(18):10

Inserts

mEGFP
mCherry

Use

Lentiviral

Mutation

a deletion was created in mCherry CDS impairing i…

Promoter

EIF1-short

Available Since

Oct. 24, 2022

Availability

Academic Institutions and Nonprofits only

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