We narrowed to 16 results for: ANG
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TypeGuide...PMID: 33230293 Yang, S., Zhang, Y., Xu, J., Zhang, J., Zhang, J., Yang, J., Jiang, Y., & Yang, S. (2021)....28931002 Cheng, A. W., Wang, H., Yang, H., Shi, L., Katz, Y., Theunissen, T. W., Rangarajan, S., Shivalila, ...Tian, R., Huang, Z., Jin, Z., Li, L., Liu, J., Huang, Z., Xie, H., Liu, D., Mo, H., Zhou, R., Lang, B., Meng...PMID: 32217751 Wang, H., Yang, H., Shivalila, C. S., Dawlaty, M. M., Cheng, A. W., Zhang, F., & Jaenisch...e04766. PMID: 25497837 Ma, Y., Zhang, J., Yin, W., Zhang, Z., Song, Y., & Chang, X. (2016). Targeted AID-mediated... Q., Xie, Z., Bai, M., Dong, R., Tang, W., Xing, Y., Zhang, H., Yang, S., Chen, L., Bartolomei, M. S.,.... You can therefore change the genomic target of the Cas enzyme by simply changing the target sequence...
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Molecular Biology Reference
TypeGuide... Addgene . Sanger Sequencing In 1975, Frederick Sanger developed the process termed Sanger sequencing,...Summary of Sanger sequencing. Created with BioRender.com. Next-generation Sequencing Although Sanger sequencing...NGS is not that different from Sanger sequencing (Figure 4). Like Sanger, NGS utilizes modified, fluorescently-tagged...membrane, and the changes in this current are recorded as the DNA is pulled through. The changes in current ... coli Strains Common Antibiotics DNA Sequencing Sanger Sequencing Next-generation Sequencing Long-read...scientists to study gene function as well as identify changes or mutations that may cause certain diseases. Sequencing... gene of interest. Sequencing technologies like Sanger sequencing and next-generation sequencing (NGS)... -
Molecular Cloning Techniques
TypeGuide...precise 5' or 3' single-strand overhangs (sticky ends), or no overhang (blunt ends). Two pieces of DNA...chewed-back” overhangs of 10–12 base pairs on the 5' end of both the vector and insert. These overhangs can easily...DNA that have complementary overhangs, or which are both blunt-ended, can then be fused during a ligation... They also cut specific target sequences, which range from four to 13 base pairs, and produce predictable... polymerase, which naturally leaves a single A overhang on the 3' end of PCR products. The complementary...depending on the polymerase used, and the single A overhangs degrade over time, further reducing ligation efficiency...’ ends of your DNA fragments, generating long overhangs that anneal to each other due to their homology... -
Lentiviral Vector Guide
TypeGuide... rev Envelope Plasmid Interchangeable; usually encodes for VSV-G Interchangeable; usually encodes for ...Lentiviral Vectors The genome of lentiviruses typically ranges from 8–10 kb, encoded on RNA (Figure 1). This RNA...common envelope gene in all systems, due to a wide range of infectivity for different cell types (known as...them into the supernatant. After an initial media change, the supernatant containing the viral vectors is...lentiviral vector will infect. This can be altered by changing the envelope gene, a process called pseudotyping...the most common envelope gene, as it has a wide range of infectivity across many cell types and enhances...LCMV) – less toxic and inflammatory; targets wide range of cell types Ebola glycoprotein — transduce airway... -
Adenovirus Guide
TypeGuide...Zheng, Z., Shu, Y., Wu, X., Lei, J., Li, Y., Zhang, W., Yang, C., Wu, K., Wu, Y., Ho, S., Athiviraham, A...viral genetic material inside. Adenoviral genomes range between 26–45 kb in length and contain multiple ...dividing and non-dividing cells. AdVs can cause a range of mild diseases in humans and other animals, most...Adenoviral Vector topics References Ahi, Y. S., Bangari, D. S., & Mittal, S. K. (2011). Adenoviral vector...21453277 (Link opens in a new window) Bulcha, J. T., Wang, Y., Ma, H., Tai, P. W. L., & Gao, G. (2021). Viral...Geisbert, J., Stanley, D., Honko, A., Johnson, J., Mulangu, S., Pau, M. G., Custers, J., Vellinga, J., Hendriks...opens in a new window) Lee, C. S., Bishop, E. S., Zhang, R., Yu, X., Farina, E. M., Yan, S., Zhao, C., Zheng... -
Optogenetics Guide
TypeGuide...a variety of different activation wavelengths, ranging from blue to yellow to red. Red light exhibits ...neuronal activation/inactivation periods. These can range from msec (hChR2) to “long lasting,” e.g. seconds...Cry2-CIB1 system, light induces a conformational change in cryptochrome Cry2 to permit CIB1 binding. As... similarly to cryptochromes with light-induced changes in protein conformation/dimerization. In addition... Blue light activation induces a conformational change in the LOV2 domain which allows SsrA to bind with...'s Lab: Optogenetics Resource Center Boyden ES, Zhang F, Bamberg E, Nagel G, Deisseroth K. 2005. Millisecond-timescale...Brain Res. 196: 1-28. PMID 22341318 Gradinaru V, Zhang F, Ramakrishnan C, Mattis J, Prakash R, Diester ... -
Antibody Guide
TypeGuide... producing antibodies, can change the constant region, and therefore change the isotype of antibodies ...variable regions, shown in light blue and light orange, that bind to a specific antigen, triggering an...constant region, and is shown in dark blue and dark orange. The constant region is a stable part of the antibody... There are several alternatives to antibodies, ranging from antibody fragments (shown in Figure 2) to ...expensive than HRP, fluorophores are available in a range of colors activated by different wavelengths, allowing... assay run. The standard curve should contain a range inclusive of all expected protein concentrates in...to distinguish cell types. Multiplex assays can range from two antibodies to upwards of twenty. Laser ... -
Gamma-Retroviral Vector Guide
TypeGuide...Gamma-Retroviral Vectors The genome of gamma-retroviruses ranges from 9–11 kb, encoded on RNA (Figure 1). This RNA...gamma-retroviral production, and scientists have made changes to these components for increased safety when producing...is the most common envelope gene, due to a wide range of infectivity for different cell types (known as... modify tropism, as the env gene can easily be changed. The HEK293T cells will produce the virus and release...it into the supernatant. After an initial media change, the supernatant containing the viral particles...gamma-retroviral vector will infect. This can be altered by changing the envelope gene, a process called pseudotyping...the most common envelope gene, as it has a wide range of infectivity across many cell types and enhances... -
Adeno-associated virus (AAV) Guide
TypeGuide... at a low frequency which has been estimated to range from 0.01% to 3% depending on cell type and rAAV...serotype, and a very high infectivity across a broad range of cell types in vivo. AAV-DJ has been optimized... ability to efficiently deliver genes to a wide range of tissues with minimal immune response, and the...as SaCas9 from Staphylococcus aureus . The Feng Zhang lab has developed plasmids containing SaCas9 optimized...15294177 (Link opens in a new window) Chan, K. Y., Jang, M. J., Yoo, B. B., Greenbaum, A., Ravi, N., Wu,...28669112 (Link opens in a new window) Tervo, D. G., Hwang, B. Y., Viswanathan, S., Gaj, T., Lavzin, M., Ritola...Lindo, S., Michael, S., Kuleshova, E., Ojala, D., Huang, C. C., Gerfen, C. R., Schiller, J., Dudman, J. ... -
Plan Your Experiment
TypeGuide...mutations, base changes, and large insertions or deletions. For more information on the wide range of CRISPR...transcriptional activators that need to be within a given range of the transcription start site in order to function...Plasmid delivery is versatile thanks to the wide range of options for the Cas enzyme, promoters, and selection...interference, and some targeted edits can lead to changes in more than just the DNA sequence. If this is ...heterozygous edits High sensitivity (good for rare edits) Sanger sequencing Knockouts Prime and base edits Good ...interference Needs a good antibody References Cong, L., & Zhang, F. (2015). Genome engineering using CRISPR-CAS9... -
Modular Cloning Guide
TypeGuide...fragments with an overhang of 4 bp. If each DNA module is flanked with a standard overhang sequence at the...cut site, multiple modules with complementary overhangs can be digested and ligated in a single step resulting...Toolkit Bacterial Expression Eric Young Broad host range vectors compatible with the CIDAR MoClo cloning ...natriegens . TALE Toolbox Genome Engineering, TALEN Feng Zhang Plasmids for building TALE nucleases (TALENs) and...protein tags, and signal peptides, for use in a range of organisms including diatoms, yeast, plants and... -
Chemogenetics Guide
TypeGuide...Link opens in a new window) Chen X, Choo H, Huang X-P, Yang X, Stone O, Roth BL, Jin J (2015). The First... DJ, Lee H-M, Sciaky N, Simmons A, Nonneman RJ, Huang X-P, Hufeisen SJ, Guettier J-M, Moy SS, Wess J, ..., Takuwa H, Hori Y, Oyama K, Ji B, Takahashi M, Huang X-P, Slocum ST, DiBerto JF, Xiong Y, Urushihata ...J, Inoue K, Kumata K, Seki C, Ono M, Shimojo M, Zhang M-R, Tomita Y, Nakahara J, Suhara T, Takada M, Higuchi... Haberman A, Graham J, Block J, Zhou W, Chen Y, Zhang S-C (2021). Human Stem Cell-Derived Neurons Repair... -
Educational Resources
TypeGuide...protocols, our educational resources cover a wide range of topics in molecular biology, laboratory research...Protocols Find written and video protocols for a wide range of applications in molecular biology, plasmid cloning... -
Promoters
TypeGuide...an inducer molecule binds to the repressor, it changes its conformation, preventing its binding to the...diverse than prokaryotic promoters and span a wider range of DNA sequences. It is not unusual to have several... -
Guide to Using Pooled Libraries
TypeGuide...consult these links: NGS Company Resources Science Exchange Scientist (formally Assay Depot) Resources Find... -
Sequencing Primers
TypeGuide...verification, Addgene has used a number of primers for Sanger sequence verification over the years. Below is ...