We narrowed to 954 results for: App;
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TypeBlog Post... in biology but don’t really know how to start applying their skills to it. The Kittybiome project gives...
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Common Injection Routes in Mice
TypeBlog Post...expertise available in your lab or organization, and approvals from the organization overseeing your work. Good... -
Transferable Skills Guide: Managing a Team
TypeBlog Post... couple of weeks now”. I had no idea this was happening even though I met with X on a weekly basis! The... -
AAV Vector Quality Control: Going the Extra Mile with NGS
TypeBlog Post...suspected, we proceed to de novo assembly of the unmapped reads, employing our bioinformatics software to... -
Quick Guide to Working with Drosophila Part 1: Getting Started with Flies
TypeBlog Post...but have run into a wall trying to study it? It happens. Is it an evolutionarily conserved gene? Can you... -
Anatomy of a Plasmid Page at Addgene
TypeBlog Post...those flames about? Flame logo: The flame that appears beside some of Addgene’s plasmids is an indication... -
Genome-wide Screening Using CRISPR
TypeBlog Post...negatives – As with any experiment, the use of appropriate controls, multiple replicates and several cell... -
Drew Endy Introduces the Biobrick Public Agreement Plasmid Collection
TypeBlog Post...substantial. It's estimated that genetic engineering as applied to products on the domestic market generates $300... -
CRISPR 101: RNA Editing with Cas13
TypeBlog Post...Addressing the potential use of RESCUE in therapeutic applications, the authors tested various dRanCas13b truncations... -
DNA Purification Without a Kit
TypeBlog Post...rather a glass powder slurry that has a milk-like appearance. To make DNA stick to the glass particles in ... -
Negative Can Be Positive: Open AAV Data with Addgene
TypeBlog Post...this information can be cited, tracked, and appropriately credited, broadening the knowledge base of AAV... -
Deep Dive: Fixing and Permeabilizing for Immunofluorescence
TypeBlog Post...the same drawbacks to each reagent type, so this approach is not suitable for all antibodies. Detergents... -
Simplify Cloning with in vivo Assembly
TypeBlog Post...protocol prior to transformation (Figure 1). As this approach requires no special reagents or purification kits... -
Plasmids 101: Protein tags
TypeBlog Post...deciding on which one to use will depend on your application (see table below). The antibodies available for... -
The PAM Requirement and Expanding CRISPR Beyond SpCas9
TypeBlog Post...to dramatically increase the number of CRISPR applications. The first non-Cas9 CRISPR protein adapted for... -
Save Time with Transient Plant Leaf Transformations
TypeBlog Post...placed in an Agrobacterium solution and a vacuum is applied with a vacuum bell or desiccator. Successful infiltration... -
Sonic Hedgehog? Sleeping Beauty? Learn About the Genes Behind Addgene’s Conference Room Names
TypeBlog Post...Often times, a gene gets its name based on what happens to an organism when a gene/protein is depleted ... -
CRISPR-mediated Plant Base Editors
TypeBlog Post...question probably comes to mind: can CRISPR be applied to fix the defective base precisely? Until 2016... -
Twenty Years of Sharing: Expanding Accessibility
TypeBlog Post...like viral preps and libraries were kept at the appropriate temperature for the duration of their journey... -
Plasmids 101: Stringent Regulation of Replication
TypeBlog Post...carefully regulated to ensure that it occurs at the appropriate time—for example, the cell must have enough nutrients... -
Filming Science Videos in the Age of Social Distancing
TypeBlog Post...refining the process down to a place I could be happy with it. Cycle 5 - The Future! Figure 5: ... -
An Integrin Antibody Toolkit from IPI
TypeBlog Post... in flow cytometry. Based on the established applications of the original hybridoma monoclonals, we anticipate... -
Thoughts on the Future of Research 2015 Boston Symposium
TypeBlog Post...many of the people who work in them are incredibly happy with their jobs. One of the Saturday Hack Day projects... -
Plasmids 101: Common Lab E. coli Strains
TypeBlog Post...common lab strain and determine whether it is appropriate for propogating your plasmid or carrying out ... -
Building Global Connections with the International Mentorship Program USA-EUROPE
TypeBlog Post...international mentor creates a closer and more approachable relationship for the mentee, where (s)he feels... -
Mycoplasma Contamination: Where Does It Come From and How to Prevent It
TypeBlog Post...under a fluorescent microscope, the mycoplasma DNA appears in the form of small clusters, apart from the cellular... -
Protocol - How to Create a Bacterial Glycerol Stock
TypeProtocol... plate . Grow your bacteria overnight at the appropriate temperature. Growth conditions, including copy... -
Personal Protective Equipment (PPE) for BSL-1 and BSL-2 Labs
TypeProtocol...requirements. Conclusion Although simple, following appropriate PPE protocol goes a long way. It is the easiest... -
Protocol - Over-Agar Antibiotic Plating
TypeProtocol...over-agar Plate shows a lawn of E. coli and no apparent selection. 150 µL of 1 mg/mL Carbenicillin plated... -
Plasmid Modification by Annealed Oligo Cloning (with Protocols)
TypeProtocol...years to come. Design Briefly, we will design overlapping oligos that once annealed can be cloned directly... -
Fluorescence Titering Assay
TypeProtocol... these cells can still be used in downstream applications. Safety Warnings Lentivirus is generally considered... -
General Transfection
TypeProtocol...), but any HEK293T cell line should work. This approach can be adapted for different cell lines and different... -
Transfection for Recombinant Antibodies
TypeProtocol...antibody can be purified for use in a variety of applications. Sharing speeds science. We believe that sharing... -
What is Polymerase Chain Reaction (PCR)
TypeProtocol...amplified. When these reagents are combined in an appropriate buffer, a series of heating (denaturing) and ... -
AAV Titration by qPCR Using SYBR Green Technology
TypeProtocol...~3.3 difference Ct for a 10-fold dilution is appropriate). Quality of duplicates: Exclude duplicates from... -
Plasmid Cloning by PCR (with Protocols)
TypeProtocol...want a recipient plasmid to insert ratio of approximately 1:3. Since the number of base pairs for each... -
Antibody Validation Using the Indirect ELISA Method
TypeProtocol...add 100 µL of primary antibody solution to the appropriate wells. Cover the plate with a plate seal and ... -
AAV Production in HEK293 Cells
TypeProtocol...incubator for ~72 h. Harvest cells and media by tapping the sides of the CS5. Cells should detach easily... -
Antibody Guide
TypeGuide...single assay. Overview of Antibody Applications Antibody-based applications can be generally classed into ...these applications, visit the Antibody section of the Addgene Protocols page. Antibody Applications - Quantification...of signaling molecules. Select one appropriate for your application and experimental design. Will you ...transcriptomics or proteomics. This approach is often appropriate for quantitative methods. Capture MS...protein of interest, with no overlapping epitopes. It is not appropriate for validation of an antibody...production and storage techniques, and explain common applications. Science... Handling Visualization Signal Amplification Application Overview Quantification Methods Capture Methods... -
CRISPR Guide
TypeGuide... (2015). A scalable Genome-Editing-Based approach for mapping multiprotein complexes in human cells. Cell...technologies. Before CRISPR, genome engineering approaches like zinc finger nucleases (ZFNs) or transcription-activator-like...rapidly became the most popular genome engineering approach. Figure 1: Overview of the basic CRISPR mechanism... to various Cas enzymes have extended CRISPR applications to increasingly complex functions, including...understanding of CRISPR biology, introduce the various applications of CRISPR, and help you get started using CRISPR... Cas12a, which are available for specialized applications. Check out our list of additional Cas proteins...genomic edits carried out by Cas9. Multiplexing applications include editing multiple genes at once; using... -
Plan Your Experiment
TypeGuide...Cas9 in mammalian cells, many of these principles apply to using CRISPR in other organisms. First, consider...a good way to narrow down which reagents are appropriate for a given experiment. Make sure to check whether...may not be a perfect plasmid for your specific application, and in such cases, it may be necessary to customize...reagent to suit your needs. Genetic Manipulation Application Cas9 gRNA Additional Considerations Knockout ...Cas enzymes increase specificity. Dual-nickase approach increases specificity but is less efficient. Each...viral delivery of CRISPR reagents may be more appropriate. In cases where off-target editing is a major...method Expression System Components of System Application Mammalian expression vector Cas enzyme promoter... -
Guide to Using Pooled Libraries
TypeGuide...library. Apply pooled library to cells. DIVERGE: Positive and negative screens POSITIVE screen: Apply library...control sample (no selection) In parallel, apply library Apply selection; most cells will survive Perform..., semi-random sequences that can be used for applications like lineage tracing or parsing the effects ...library Apply selection Most cells die or do not pass selection (in the case of a reporter) Sort “winning...genes involved in the selection NEGATIVE screen: Apply library Perform Next Generation Sequencing (NGS)...and control cells Generate a list of gRNAs that disappear with addition of the selection mechanism Positive... -
Adeno-associated virus (AAV) Guide
TypeGuide...to be used as viral vectors for gene therapy applications. This guide contains many viral vector-specific...preferred over standard rAAV vectors for in vivo applications. Other Engineered Variants Hybrid capsids Hybrid...Vectors rAAV vectors are valuable in diverse applications due to their unique properties, including their...biomedical fields. Gene Therapy One of the major applications of rAAV vectors is in the field of gene therapy...mutagenesis. Several AAV-based gene therapies have been approved by the US Food and Drug Administration (FDA) to...neurons within the brain. Large-scale examples of mapping the brain through neuronal tracing with rAAV vectors...transgenes, enabling the development of further AAV applications. Read our blog post on split AAVs for more information... -
Cloning
TypeGuide...move around pieces of DNA. Oftentimes several approaches will work for any specific cloning project; however...likely that for any given project there is an ideal approach. This may be due to speed, cost, availability ... of time required for cloning. To utilize this approach, the fragment of DNA that you would like to clone...fragment (PCR product or synthesized oligo) with appropriate overhangs can be efficiently ligated into any... enzyme cloning. Scientists have utilized this approach to create compatible custom overhangs that can...fragments of dsDNA that have 30 or more bases of overlapping homology. One major advantage is that much larger... -
Gamma-Retroviral Vector Guide
TypeGuide... popular choice in gene therapy applications. There are many approved gamma-retroviral gene therapies ...retroviral vectors are commonly used in gene therapy applications to more specifically direct delivery of gene...lentiviral vectors, but a similar method can be applied when using gamma-retroviral vectors. Gene Therapy...cell (CAR-T) therapy is a particularly popular application of gamma-retroviral vectors. Gamma-retroviral...Gammaretroviral vectors: Biology, technology and application. Viruses , 3 (6), 677–713. https://doi.org/10.3390... -
Lentiviral Vector Guide
TypeGuide...random and difficult to predict. In therapeutic applications, like chimeric antigen receptor T cell (CAR-...Pseudotyped lentiviral vectors are common in clinical applications, like gene therapy, as you can more specifically...accurate and multiplexable method for genome-wide mapping of lentiviral integration sites. Molecular Therapy... in chromatin architecture through large-scale mapping of lentiviral integration sites. Nature Protocols...2020). An analytical pipeline for identifying and mapping the integration sites of HIV and other retroviruses...begins, by definition, at the beginning of R, is capped, and proceeds through U5 and the rest of the provirus... -
Chemogenetics Guide
TypeGuide...neurons) that can be turned on or off by the application of a small molecule ligand. The ideal chemogenetic...translational studies because it is FDA and EMA approved. One pitfall of a suite of muscarinic-based DREADDs... develop a PSAM that responded to a clinically approved drug, the PSAM domain was engineered to respond...Azua IR, Li JH, et al. (2009). A chemical-genetic approach to study G protein regulation of β cell function...chemogenetics for research and potential clinical applications. Science. 364(6436):eaav5282. PMID: 30872534... -
Optogenetics Guide
TypeGuide...the light source. Optogenetics has been broadly applied to study the physiology of the brain and nervous... peak expression of the opsin is reached. This approach is especially powerful when combined with site...conformation/dimerization. In addition to the applications described above, both LOV and Dronpa can control...KR, Deisseroth K. 2010 Molecular and cellular approaches for diversifying and extending optogenetics. ..., Yizhar O, Deisseroth K. 2011. Principles for applying optogenetic tools derived from direct comparative... -
Molecular Biology Reference
TypeGuide...species and can be useful for a diverse set of applications - Plasmids can drive gene expression in a wide...a primer. A primer is a small piece of DNA, approximately 18-22 nucleotides, that binds to complementary...each fluorescent signal. Sanger can sequence approximately 500-1000 bases downstream of the known primer...pieces in only a few reactions.There are multiple approaches to acquire NGS but one of the most commonly used... -
Addgene's eBook Collection
TypeGuide...contains an introduction to each vector and its applications, tips for using vectors in your experiments,...your transferable skills, and tips on the job application process. Close About Overlay Select CRISPR 101...introductions and helpful tips for antibody-based applications, from flow to IHC! Close About Overlay 0 of ...