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pYTK089

Plasmid

#65196

Purpose

Encodes AmpR-ColE1 as a Type 8a part to be used in the Dueber YTK system

Depositor

John Dueber

Publication

Lee et al ACS Synth Biol. 2015 Apr 14.

Insert

AmpR-ColE1

Expression

Bacterial

Available since

June 16, 2015

Availability

Academic Institutions and Nonprofits only

Cited by

3 Articles

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pYTK050

Plasmid

#65157

Purpose

Encodes sgRNA Dropout as a Type 234 part to be used in the Dueber YTK system

Depositor

John Dueber

Publication

Lee et al ACS Synth Biol. 2015 Apr 14.

Type

Empty backbone

Expression

Bacterial

Available since

June 16, 2015

Availability

Academic Institutions and Nonprofits only

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pYTK002

Plasmid

#65109

Purpose

Encodes ConLS as a Type 1 part to be used in the Dueber YTK system

Depositor

John Dueber

Publication

Lee et al ACS Synth Biol. 2015 Apr 14.

Insert

ConLS

Expression

Bacterial

Available since

June 16, 2015

Availability

Academic Institutions and Nonprofits only

Cited by

2 Articles

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pTH1-SpSrtA

Plasmid

#64987

Purpose

Expresses the wild type of Streptococcus pyogenes sortase A in E. coli

Depositor

Teruyuki Nagamune

Publication

Hirakawa et al Biotechnol Bioeng. 2012 Dec;109(12):2955

Insert

S. pyogenes sortase A

Tags

His6 tag, Mxe GyrA intein, and chitin-binding pro…

Expression

Bacterial

Mutation

deleted amino acids 1-81

Promoter

T7 promoter

Available since

June 5, 2015

Availability

Academic Institutions and Nonprofits only

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pCRISPReporter

Plasmid

#65007

Purpose

E. coli reporter vector with MCS for inserting bacterial promoter region through 5' end of gene of interest, upstream and in-frame with reporter cloning site

Depositor

Mattheos Koffas

Publication

Cress et al ACS Synth Biol. 2015 Mar 30.

Type

Empty backbone

Use

CRISPR and Synthetic Biology

Expression

Bacterial

Promoter

none

Available since

May 27, 2015

Availability

Academic Institutions and Nonprofits only

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human PNP non-tagged

Plasmid

#64199

Purpose

Expression of native human PNP (non-tagged)

Depositor

Vern Schramm

Publication

Murkin et al Biochemistry. 2007 May 1;46(17):5038-49.

Insert

Purine Nucleoside Phosphorylase (PNP Human)

Tags

none

Expression

Bacterial

Available since

April 29, 2015

Availability

Academic Institutions and Nonprofits only

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pSNAPf-AP

Plasmid

#61830

Purpose

Encodes SNAP-AP fusion for tagging endogenous target for SNAP-SiMPull

Depositor

Aaron Hoskins

Publication

Rodgers et al RNA. 2015 May;21(5):1031-41. doi: 10.126

Insert

SNAP-AP

Use

Pcr template

Expression

Bacterial and Yeast

Available since

April 16, 2015

Availability

Academic Institutions and Nonprofits only
pAN-NOR

Plasmid

#62306

Purpose

synthetic circuit: NOR gate

Depositor

Christopher Voigt

Publication

Nielsen et al Mol Syst Biol. 2014 Nov 24;10:763. doi:

Inserts

A2NT sgRNA
A2NT sgRNA

Use

CRISPR

Expression

Bacterial

Promoter

PPhlF and pBAD

Available since

April 8, 2015

Availability

Academic Institutions and Nonprofits only

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pXRM15

Plasmid

#63150

Purpose

Met15 marker pXR vector uses for both plasmid assembly in vivo, as well as targeted genomic integration.

Depositor

Marc Gartenberg

Publication

Chou et al FEMS Yeast Res. 2015 May;15(3):fov010. d

Type

Empty backbone

Use

Cre/Lox

Expression

Bacterial and Yeast

Available since

April 3, 2015

Availability

Academic Institutions and Nonprofits only

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pXRA2

Plasmid

#63144

Purpose

ADE2 marker pXR vector uses for both plasmid assembly in vivo, as well as targeted genomic integration.

Depositor

Marc Gartenberg

Publication

Chou et al FEMS Yeast Res. 2015 May;15(3):fov010. d

Type

Empty backbone

Use

Cre/Lox

Expression

Bacterial and Yeast

Available since

April 3, 2015

Availability

Academic Institutions and Nonprofits only

Cited by

1 Article

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pCol1a1-frt (FVB)

Plasmid

#63575

Purpose

Targeting vector for the Col1a1 locus that contains a Neo resistance cassette flanked by FRT sites, followed by an ATG-less Hygromycine resistance gene. The homology arms match the sequence of FVB.

Depositor

Ivo Huijbers

Publication

Huijbers et al Nat Protoc. 2015 Nov;10(11):1755-85. doi

Insert

Col1A-frt-hygro-pA

Use

Mouse Targeting; Frt/flpe

Expression

Bacterial and Mammalian

Promoter

None

Available since

March 25, 2015

Availability

Academic Institutions and Nonprofits only

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pReporter_3

Plasmid

#60564

Purpose

A reporter plasmid containing the attB and attP sites flanking a green fluorescent protein reporter gene (gfp).

Depositor

Christopher Voigt

Publication

Yang et al Nat Methods. 2014 Dec;11(12):1261-6. doi

Insert

Reporter_3

Expression

Bacterial

Promoter

BBa_J23119

Available since

March 16, 2015

Availability

Academic Institutions and Nonprofits only

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pReporter_2

Plasmid

#60563

Purpose

A reporter plasmid containing the attB and attP sites flanking a green fluorescent protein reporter gene (gfp).

Depositor

Christopher Voigt

Publication

Yang et al Nat Methods. 2014 Dec;11(12):1261-6. doi

Insert

Reporter_2

Expression

Bacterial

Promoter

BBa_J23119

Available since

March 16, 2015

Availability

Academic Institutions and Nonprofits only

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pET15b-Opt12

Plasmid

#61697

Purpose

Expresses PTDH mutant Opt12

Depositor

Huimin Zhao

Publication

McLachlan et al Biotechnol Bioeng. 2008 Feb 1;99(2):268-

Insert

Opt12

Tags

6xHis

Expression

Bacterial

Promoter

T7

Available since

March 3, 2015

Availability

Academic Institutions and Nonprofits only
3I91

Plasmid

#62514

Purpose

Bacterial expression plasmid for use in structural determination.

Depositor

Cheryl Arrowsmith

Publication

Kaustov et al J Biol Chem. 2011 Jan 7;286(1):521-9. do

Insert

CBX8 (CBX8 Human)

Tags

6xHis and TEV cleavage

Expression

Bacterial

Promoter

T7

Available since

Feb. 27, 2015

Availability

Industry, Academic Institutions, and Nonprofits

Cited by

3 Articles
pNAS1B split mCherry N-link/link-C

Plasmid

#61965

Purpose

Negative control duet plasmid for split mCherry assembly assay (i.e., neither half of mCherry is fused to another peptide or protein)

Depositor

Lynne Regan

Publication

Sawyer et al ACS Chem Biol. 2014 Nov 21;9(11):2502-7.

Inserts

N-mCherry-link
link-C-mCherry

Expression

Bacterial

Promoter

PBAD and PLtetO

Available since

Feb. 13, 2015

Availability

Academic Institutions and Nonprofits only

Cited by

1 Article

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pET28-p53 (1-90) (72P)

Plasmid

#62080

Purpose

Expression of human p53 (1-90) (72P) in e. coli

Depositor

Gary Daughdrill

Publication

Borcherds et al Nat Chem Biol. 2014 Dec;10(12):1000-2. d

Insert

p53 (TP53 Human)

Tags

His

Expression

Bacterial

Mutation

contains TAD/PP residues 1-90; 72P

Promoter

T7

Available since

Jan. 29, 2015

Availability

Academic Institutions and Nonprofits only
pCBFD2Bad

Plasmid

#53574

Purpose

Produces an active CBFD (carotenoid β-ring 4-dehydrogenase) enzyme in E. coli when expression is induced with arabinose

Depositor

Francis X Cunningham Jr

Publication

Cunningham FX et al Plant Cell. 2011 Aug;23(8):3055-69. doi:

Insert

cbfd2

Expression

Bacterial

Promoter

araBAD

Available since

Jan. 21, 2015

Availability

Academic Institutions and Nonprofits only

Cited by

1 Article

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pET28a-CohIII-CBM-HIS-ybbR

Plasmid

#60866

Purpose

Characteristic fingerprint molecule fused to cohesin type III domain to perform single molecule force spectroscopy experiments; covalently immobilized via introduced ybbR tag

Depositor

Hermann Gaub

Publication

Schoeler et al Nat Commun. 2014 Dec 8;5:5635. doi: 10.1

Inserts

CohIII
CBM

Tags

6xHIS, HRV 3C, and ybbR

Expression

Bacterial

Mutation

Cysteine 63 to Serine in CBM module

Promoter

T7

Available since

Nov. 26, 2014

Availability

Academic Institutions and Nonprofits only

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pET-22HT-MSI2(8-193)

Plasmid

#60356

Purpose

Express the RBD of human MSI2 in bacterial cells for protein purification

Depositor

Sean Ryder

Publication

Clingman et al Elife. 2014 Jun 16:e02848. doi: 10.7554/

Insert

human MSI2 (8-193) (MSI2 Human)

Tags

His and TEV protease site

Expression

Bacterial

Mutation

contains amino acids 8-193 of MSI2

Promoter

T7

Available since

Oct. 27, 2014

Availability

Academic Institutions and Nonprofits only

Cited by

1 Article

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